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  1. Transcript 'KH2012:KH.L18.71.v1....'

Transcript Model

Transcript Id

KH2012:KH.L18.71.v1.A.SL1-1

Possible name(s)

RPUSD1; RPUSD3; RPUSD4

Location

KhL18 [506,896 / 509,933]

Sequences

Amino acid sequence

Length: 509

>KH.L18.71.v1.A.SL1-1
NHVSFCVKLKSFNINMKLSETLAVLRILRNFKGIGVNQNSLKHRPVLSSYHTSYNIQSVR
GLRNKSTSKSTLENEQMQENLQEFIRLSNKKVQRNTKTVSNVTTDPELNFTVSSVESVPD
VPVEKKRETGMDIAVKMRRENRGLTQSIKSKHRGVDLLKPIDVNLLSDVRLTKLLRKNVI
YADNKLVIFNKPYGLPMHDGDGTKQTVKNVLPFLSKMVYGINTDIPLHLCHRLDKNTTGI
TICSTDAEMADYVMGLFRQRRVLRKYLAVVVGEPEPMKGVVDMPMSESIVSATKSTKRHS
RMIIKPDVRYDDATGKEYPLRNAGGHTAITHYRTIDTTGDLSLVELQPQTTVKHQLRVHM
ADGLSCPILGDHKYSRYGSLAPQVLPPRVLRMFNIPHSKSRYMPLHLHLQQVLIPGVLDG
SKPNMVVGSRLPFHFSRTLNLLKMKPGAHEGWEGDHRPVRNTTAEPLRQDNDLYTDPTRS
QTSETSAFDQTDDCEKVFRTRIKVKYRPT

Nucleotide sequence

Length: 1,820

>KH2012:KH.L18.71.v1.A.SL1-1
TAACCATGTTAGCTTTTGTGTTAAACTAAAATCATTTAACATAAATATGAAACTTAGTGA
AACACTGGCTGTTCTAAGAATTCTTAGAAATTTTAAAGGAATCGGGGTAAATCAAAATTC
TTTAAAGCATAGACCCGTATTATCATCATACCATACAAGTTACAATATTCAATCTGTTCG
AGGATTGCGCAACAAATCAACCTCAAAATCAACGCTTGAAAATGAACAGATGCAAGAAAA
TTTACAAGAGTTTATTCGACTTTCTAACAAGAAAGTTCAACGAAACACAAAGACTGTAAG
CAATGTCACTACAGACCCTGAGCTCAACTTCACAGTTAGTAGTGTAGAATCTGTTCCTGA
TGTACCAGTAGAGAAGAAACGAGAAACAGGAATGGATATTGCTGTAAAGATGAGAAGAGA
AAACCGAGGTTTAACTCAGTCTATAAAGTCAAAACATCGTGGTGTAGACTTACTGAAACC
GATCGATGTAAATCTATTATCTGATGTTCGACTGACCAAGCTGCTTCGAAAGAATGTTAT
CTACGCTGATAATAAACTTGTTATATTTAACAAACCTTATGGATTGCCAATGCATGATGG
GGACGGTACAAAACAAACTGTGAAAAATGTTTTGCCATTTCTGTCGAAAATGGTTTACGG
TATTAACACTGATATTCCATTGCACCTGTGTCATCGACTGGACAAAAATACGACTGGTAT
AACAATTTGTAGCACAGATGCAGAGATGGCTGATTATGTAATGGGATTATTCCGGCAGCG
TCGAGTACTGAGAAAATACCTAGCAGTTGTGGTTGGGGAGCCTGAGCCAATGAAAGGTGT
GGTTGATATGCCAATGTCGGAAAGCATTGTGTCTGCCACTAAATCTACAAAACGTCATTC
ACGGATGATAATAAAACCTGATGTGAGATACGATGATGCAACTGGGAAAGAATATCCACT
TCGTAATGCGGGTGGCCACACTGCAATTACGCATTATCGAACCATTGATACAACAGGAGA
TTTATCTTTGGTTGAGCTTCAACCTCAAACAACCGTAAAACACCAGCTGCGTGTGCATAT
GGCGGATGGCTTGTCCTGTCCAATACTTGGCGATCATAAATACTCGCGGTACGGCTCACT
GGCGCCACAGGTCTTACCACCGAGGGTGTTGAGAATGTTTAATATACCACACTCCAAATC
TCGCTATATGCCTTTGCATTTACATCTTCAGCAAGTGCTAATTCCAGGTGTTTTGGATGG
TTCCAAGCCTAACATGGTAGTTGGATCTCGTTTGCCTTTCCACTTTAGTAGGACTCTCAA
TTTGCTCAAAATGAAGCCAGGAGCACATGAAGGCTGGGAAGGGGACCATCGTCCTGTTCG
AAATACAACAGCTGAACCTTTACGCCAAGATAATGATCTTTACACTGATCCTACAAGGTC
TCAAACTTCTGAGACCTCTGCGTTTGACCAAACAGACGACTGCGAAAAAGTTTTTCGAAC
TCGAATTAAAGTGAAATACAGGCCCACCTAATAAACTGGCATTCTTATGTTTAAACTGAA
TGAAACTGGTTTGATTTTAATATGCAGTTTATTCCAAGTCAACAATACTGGACACAACAC
AGAAAAGAAAGCAAGAAACCTTTTACCAAGCGTACCGAACACCTCATAAAACAACATAAT
TACGAACTTTTATAATTGGTTGAATAAATAGTGAACACTGGTCTGGGTTGTATAAGCAAA
GATAATAAAATTATGGGTAAAAGTGAACTTTGTAGGTTCGGTTCGCTCAACATCAATTGC
TGGCCCAATACACGTCATCG

InterProScan

SUPERFAMILY
PsdUridine_synth_cat_dom_sf (IPR020103) - T[175-444] 4.86E-41
Pfam
PsdUridine_synth_RsuA/RluD (IPR006145) - T[186-361] 1.3E-27
CDD
PsdUridine_synth_RsuA/RluD (IPR006145) - T[186-393] 1.7168E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUSD4_HUMAN 43.478 % 238 1.09E-73