- Transcript 'KH2012:KH.L153.79.v1...' >
- Molecular Tool 'Msx>FoxD Full' >
- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'KH2012:KH.L172.8.v2....'
Transcript Model
Transcript Id
KH2012:KH.L172.8.v2.A.SL1-1
Possible name(s)
MLH1; PMS1; PMS2
Gene model
Location
KhL172 [38,479 / 44,375]
Amino acid sequence
Length: 833
>KH.L172.8.v2.A.SL1-1
KMSIIEAIDKKSVHQICSGQVIVDLPTAVKELVENSLDAGATNVEIRLKSFGLLSIEVID
DGHGVEERNFHGLTMKHHTSKLTNFTDLRLVETFGFRGEALSSLCAVCDVIICTKHNNAS
SGHRMSFNHEGHMTSKTPCARRIGTSVILRNIFSTIPVRRKEFMKNIKKEYSKLLNLVSA
YCVVSTRVKITCSNETDGGKKTTSLSTGGATTMEENIISIFGSKQFRNLQEFRQDIPTQE
SCDTYNVSVASDWSIFKLHGFVSVPRHGAGRSSPDRQFFFVNSRPITLPRLSKIVNEVYH
RFNRHQFPFIAINITTRHDLVDVNVTPDKRKVFFQNENLLFAIMTSSMTQLYSLDGCHEV
GSTECSISLPCRSPSVTETSQTFSPLSSFRRTMGDDVINSDITKPRKRSASFATKVAKQP
RLDKFVMTQHKVTSQCWPVLPDQNNERSVLPDQSNGQQVLPDQNNERPVLPDQSNGQPVL
PDQNNGRPVLPDQSNRQPVLPDQNNERPVLPDQSNGQPVLPDQNNGRPVLPDKSNGQPVL
PDQNNGRPVLPDHNNGQPVLPDQNNGQPVLPDAKHPSNIGDSHVVDTPRLSQTSETSLKF
SFKHLMEFYKEKKKPSQPPTEYSLFRANLADTTTAEAELTKNLDKSSFQQMAPVGQFNLG
FVIGRHGNDLFIIDQHASDEIYNYETLQATQTLQTQNLVVPLKLQLTPAGKIVLIENLEI
FRKNGFGFKISSDEATIHLTTIPTHNPHPLGPPDIDEMIFMLSDAPGVMCRPTRVRRIFA
TRACRMSTMIGTSLTKRQMLRLIRHMSEIVHPWNCPHGRPTMRHLIDIGKLRQ
Nucleotide sequence
Length: 3,389
>KH2012:KH.L172.8.v2.A.SL1-1
AAAATGTCTATAATTGAAGCGATTGATAAAAAGTCGGTTCACCAAATTTGTTCGGGTCAA
GTTATCGTAGATTTGCCGACGGCTGTTAAGGAACTTGTGGAGAATAGTTTGGATGCTGGG
GCTACTAATGTGGAAATCCGATTAAAATCGTTTGGATTGTTGTCGATTGAGGTAATCGAC
GACGGGCATGGGGTCGAGGAACGGAACTTTCATGGATTGACGATGAAACACCACACTTCG
AAACTAACGAACTTTACCGATCTCCGATTGGTTGAAACTTTTGGTTTCCGTGGAGAAGCG
TTGAGTTCATTGTGTGCCGTGTGTGATGTCATAATATGCACAAAACATAACAATGCCAGT
TCTGGCCACCGAATGTCGTTTAACCACGAAGGTCACATGACCTCCAAAACACCTTGTGCT
CGACGAATCGGAACATCTGTGATTTTACGAAACATTTTTTCAACCATTCCTGTACGACGA
AAAGAATTTATGAAAAATATTAAAAAGGAATATTCAAAACTTTTAAACCTCGTAAGCGCT
TATTGCGTCGTTTCAACGAGGGTGAAAATAACTTGCAGTAATGAGACCGATGGAGGAAAG
AAGACAACCTCGTTGTCAACAGGAGGCGCCACAACCATGGAGGAAAATATTATTTCTATT
TTTGGGTCGAAACAATTTCGTAATTTACAAGAATTCCGACAAGATATCCCAACACAAGAG
TCATGTGACACATACAACGTTAGTGTGGCTTCCGATTGGTCAATATTTAAACTCCACGGG
TTTGTATCGGTGCCACGGCACGGAGCCGGACGATCGTCTCCTGACAGACAATTCTTCTTC
GTTAATTCTCGACCAATCACGTTGCCGCGTTTGTCCAAGATTGTAAACGAGGTTTATCAT
AGATTCAACAGACACCAGTTCCCGTTCATAGCGATAAACATAACGACCCGTCATGACTTA
GTCGACGTCAACGTAACACCGGATAAACGGAAAGTTTTCTTTCAAAACGAGAACTTATTG
TTTGCCATTATGACATCATCGATGACACAACTTTATTCGCTCGACGGTTGCCATGAGGTT
GGCTCCACTGAGTGTTCAATAAGTTTGCCGTGCAGATCTCCAAGCGTCACGGAAACTTCT
CAAACTTTTTCTCCATTGTCCTCGTTCCGAAGAACAATGGGTGATGATGTCATCAATAGT
GACATCACAAAGCCTCGGAAACGATCGGCAAGTTTTGCGACAAAAGTTGCAAAACAACCA
CGACTAGACAAATTTGTGATGACTCAGCATAAAGTGACATCACAATGTTGGCCAGTGTTG
CCAGACCAAAACAATGAACGATCAGTGTTGCCAGATCAAAGTAATGGACAACAAGTGTTG
CCAGACCAAAACAATGAACGACCAGTGTTGCCAGATCAAAGTAATGGACAACCAGTGTTG
CCAGATCAAAATAATGGACGACCAGTGTTGCCAGATCAAAGTAATAGACAACCAGTGTTG
CCAGATCAAAATAATGAACGACCAGTGTTGCCAGATCAAAGTAATGGACAACCAGTGTTG
CCAGATCAAAATAATGGACGACCAGTGTTGCCAGATAAAAGTAATGGACAACCAGTGTTG
CCAGATCAAAATAATGGACGACCAGTGTTGCCAGATCATAATAATGGACAACCAGTGTTG
CCAGATCAAAATAATGGACAACCAGTGTTGCCAGATGCAAAACATCCCTCCAACATAGGT
GATTCCCACGTTGTGGACACACCTCGGCTATCGCAAACGTCCGAAACTTCGCTGAAATTT
TCATTTAAACATTTGATGGAATTTTACAAAGAAAAAAAAAAACCCTCGCAACCCCCGACA
GAATATTCCTTGTTTCGTGCCAACCTTGCCGACACCACAACTGCTGAAGCGGAACTGACA
AAGAATCTCGATAAATCGTCGTTCCAGCAGATGGCGCCGGTGGGTCAATTCAACCTCGGG
TTCGTTATCGGTCGTCACGGAAACGATTTGTTTATTATCGACCAGCACGCCTCTGATGAA
ATATACAACTATGAAACCTTACAAGCCACACAAACCCTACAAACACAAAATCTTGTTGTA
CCGCTGAAACTACAACTCACGCCTGCTGGCAAAATTGTTTTGATCGAAAATCTTGAAATT
TTTCGCAAGAATGGATTTGGATTTAAGATTAGTTCAGATGAAGCTACCATCCACCTTACA
ACCATACCCACCCATAACCCCCACCCCCTCGGACCGCCCGATATCGATGAAATGATATTT
ATGCTCTCTGATGCCCCCGGTGTCATGTGTCGTCCAACAAGGGTTCGCCGAATCTTCGCC
ACACGAGCGTGTCGAATGTCCACAATGATAGGCACCTCGTTAACGAAGCGACAAATGTTA
CGGTTGATTCGTCACATGTCCGAGATCGTTCATCCGTGGAATTGTCCGCATGGTCGCCCA
ACCATGCGGCATCTTATCGATATCGGGAAACTTAGACAATAAAGTTTTATTATCTAACAA
TTAAACCATTGTTTTGAAACAATCGAGTTATTATTGTTATTGTTCTATCTTTGAATGTAT
ATTTTATTTTGCTTTTCTTATTTTTCCAGATTTAGGTTTTTATAATATTTCTATTTAATG
ATGTCATCGCATCGTCAATATGATGACGAGCCACACGAGGCAGTAGCGAGCATGGGGAGA
AAAGTTTGTCGGGTTTGCGACGATTTTAAAAGTTGGAGGAAAAACAAAAACGAGGAACCC
CGCAGCCCCTCGTGCCCGCTGGACCGTGAAGAGCTTGGTCGTAACACATGGTCTTTTATC
CACACGATGGCAGCATACTACCCTCGCAAACCAACAGAGCAACAACAATGCGAGATGAAA
CAATTTATTGAAAGCTTTTCAAAGTTTTATCCATGTGTGGACTGCGCTGAGGATTTAAGG
AAAAACATAAAACTGAACCCCCCAAAAGTTGGCGGACGCGTCGATTTATCTCGTTGGTTT
TGTGAACAACATAATATTGTAAACCTTAAATTGGGGAAGCAACAATTCGATTGTTCAAAA
GTTCTAGAAAGATGGAAAAATGGATGGAAGGATGGATCGTGCGATTAAGCATTGTGACGT
CATATACTTGTTTATTATGACGTCATAATTAATTTAATATAATCACTTTTTGACAATAAA
TTTTGTGACATCGCAAACATTTTTTGATATTAAAAACATGACGTCATACATATTTGATTC
ATTGGTAAGTCACAATACTGCAATGAAATCTTTTGAACTCCCCAAAAAATTAATAAAAAA
CTTTTAATTTTGTTATTTATGGCTTGCCGGGTTCGGTATATAAGCTGTTTGCCGCCGCAA
GTGGCCACTCATGTTGTAGGGTGTGCCAG
| Gene3D |
HATPase_C_sf (IPR036890) - T[1-221] 4.9E-75 |
| TIGRFAM |
DNA_mismatch_repair_fam (IPR002099) - T[5-332] 2.0E-90 |
| SUPERFAMILY |
HATPase_C_sf (IPR036890) - T[19-218] 1.19E-47 |
| CDD |
HATPase_C (IPR003594) - T[28-103] 5.85157E-5 |
| ProSitePatterns |
DNA_mismatch_repair_CS (IPR014762) - T[95-101] . |
| SUPERFAMILY |
Ribosomal_S5_D2-typ_fold (IPR020568) - T[199-352] 6.07E-34 |
| SMART |
DNA_mismatch_repair_C (IPR013507) - T[217-353] 3.2E-43 |
| Gene3D |
Ribosomal_S5_D2-typ_fold_subgr (IPR014721) - T[222-353] 7.7E-43 |
| Pfam |
DNA_mismatch_repair_C (IPR013507) - T[247-352] 1.3E-24 |
| SUPERFAMILY |
MutL_C_sf (IPR037198) - T[650-825] 4.05E-26 |
| SMART |
MutL_C (IPR014790) - T[653-794] 6.5E-35 |
| Pfam |
MutL_C (IPR014790) - T[654-794] 6.6E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PMS2_HUMAN | 51.989 % | 397 | 2.75E-125 |
| PM2P1_HUMAN | 59.524 % | 199 | 2.65E-56 |
| PM2P2_HUMAN | 56.805 % | 191 | 6.1E-55 |