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  1. Transcript 'KH2012:KH.L153.79.v1...'
  2. Transcript 'Phfumi.CG.MTP2014.S8...'
  3. Transcript 'KH2012:KH.L172.8.v2....'

Transcript Model

Transcript Id

KH2012:KH.L172.8.v2.A.SL1-1

Possible name(s)

MLH1; PMS1; PMS2

Location

KhL172 [38,479 / 44,375]

Sequences

Amino acid sequence

Length: 833

>KH.L172.8.v2.A.SL1-1
KMSIIEAIDKKSVHQICSGQVIVDLPTAVKELVENSLDAGATNVEIRLKSFGLLSIEVID
DGHGVEERNFHGLTMKHHTSKLTNFTDLRLVETFGFRGEALSSLCAVCDVIICTKHNNAS
SGHRMSFNHEGHMTSKTPCARRIGTSVILRNIFSTIPVRRKEFMKNIKKEYSKLLNLVSA
YCVVSTRVKITCSNETDGGKKTTSLSTGGATTMEENIISIFGSKQFRNLQEFRQDIPTQE
SCDTYNVSVASDWSIFKLHGFVSVPRHGAGRSSPDRQFFFVNSRPITLPRLSKIVNEVYH
RFNRHQFPFIAINITTRHDLVDVNVTPDKRKVFFQNENLLFAIMTSSMTQLYSLDGCHEV
GSTECSISLPCRSPSVTETSQTFSPLSSFRRTMGDDVINSDITKPRKRSASFATKVAKQP
RLDKFVMTQHKVTSQCWPVLPDQNNERSVLPDQSNGQQVLPDQNNERPVLPDQSNGQPVL
PDQNNGRPVLPDQSNRQPVLPDQNNERPVLPDQSNGQPVLPDQNNGRPVLPDKSNGQPVL
PDQNNGRPVLPDHNNGQPVLPDQNNGQPVLPDAKHPSNIGDSHVVDTPRLSQTSETSLKF
SFKHLMEFYKEKKKPSQPPTEYSLFRANLADTTTAEAELTKNLDKSSFQQMAPVGQFNLG
FVIGRHGNDLFIIDQHASDEIYNYETLQATQTLQTQNLVVPLKLQLTPAGKIVLIENLEI
FRKNGFGFKISSDEATIHLTTIPTHNPHPLGPPDIDEMIFMLSDAPGVMCRPTRVRRIFA
TRACRMSTMIGTSLTKRQMLRLIRHMSEIVHPWNCPHGRPTMRHLIDIGKLRQ

Nucleotide sequence

Length: 3,389

>KH2012:KH.L172.8.v2.A.SL1-1
AAAATGTCTATAATTGAAGCGATTGATAAAAAGTCGGTTCACCAAATTTGTTCGGGTCAA
GTTATCGTAGATTTGCCGACGGCTGTTAAGGAACTTGTGGAGAATAGTTTGGATGCTGGG
GCTACTAATGTGGAAATCCGATTAAAATCGTTTGGATTGTTGTCGATTGAGGTAATCGAC
GACGGGCATGGGGTCGAGGAACGGAACTTTCATGGATTGACGATGAAACACCACACTTCG
AAACTAACGAACTTTACCGATCTCCGATTGGTTGAAACTTTTGGTTTCCGTGGAGAAGCG
TTGAGTTCATTGTGTGCCGTGTGTGATGTCATAATATGCACAAAACATAACAATGCCAGT
TCTGGCCACCGAATGTCGTTTAACCACGAAGGTCACATGACCTCCAAAACACCTTGTGCT
CGACGAATCGGAACATCTGTGATTTTACGAAACATTTTTTCAACCATTCCTGTACGACGA
AAAGAATTTATGAAAAATATTAAAAAGGAATATTCAAAACTTTTAAACCTCGTAAGCGCT
TATTGCGTCGTTTCAACGAGGGTGAAAATAACTTGCAGTAATGAGACCGATGGAGGAAAG
AAGACAACCTCGTTGTCAACAGGAGGCGCCACAACCATGGAGGAAAATATTATTTCTATT
TTTGGGTCGAAACAATTTCGTAATTTACAAGAATTCCGACAAGATATCCCAACACAAGAG
TCATGTGACACATACAACGTTAGTGTGGCTTCCGATTGGTCAATATTTAAACTCCACGGG
TTTGTATCGGTGCCACGGCACGGAGCCGGACGATCGTCTCCTGACAGACAATTCTTCTTC
GTTAATTCTCGACCAATCACGTTGCCGCGTTTGTCCAAGATTGTAAACGAGGTTTATCAT
AGATTCAACAGACACCAGTTCCCGTTCATAGCGATAAACATAACGACCCGTCATGACTTA
GTCGACGTCAACGTAACACCGGATAAACGGAAAGTTTTCTTTCAAAACGAGAACTTATTG
TTTGCCATTATGACATCATCGATGACACAACTTTATTCGCTCGACGGTTGCCATGAGGTT
GGCTCCACTGAGTGTTCAATAAGTTTGCCGTGCAGATCTCCAAGCGTCACGGAAACTTCT
CAAACTTTTTCTCCATTGTCCTCGTTCCGAAGAACAATGGGTGATGATGTCATCAATAGT
GACATCACAAAGCCTCGGAAACGATCGGCAAGTTTTGCGACAAAAGTTGCAAAACAACCA
CGACTAGACAAATTTGTGATGACTCAGCATAAAGTGACATCACAATGTTGGCCAGTGTTG
CCAGACCAAAACAATGAACGATCAGTGTTGCCAGATCAAAGTAATGGACAACAAGTGTTG
CCAGACCAAAACAATGAACGACCAGTGTTGCCAGATCAAAGTAATGGACAACCAGTGTTG
CCAGATCAAAATAATGGACGACCAGTGTTGCCAGATCAAAGTAATAGACAACCAGTGTTG
CCAGATCAAAATAATGAACGACCAGTGTTGCCAGATCAAAGTAATGGACAACCAGTGTTG
CCAGATCAAAATAATGGACGACCAGTGTTGCCAGATAAAAGTAATGGACAACCAGTGTTG
CCAGATCAAAATAATGGACGACCAGTGTTGCCAGATCATAATAATGGACAACCAGTGTTG
CCAGATCAAAATAATGGACAACCAGTGTTGCCAGATGCAAAACATCCCTCCAACATAGGT
GATTCCCACGTTGTGGACACACCTCGGCTATCGCAAACGTCCGAAACTTCGCTGAAATTT
TCATTTAAACATTTGATGGAATTTTACAAAGAAAAAAAAAAACCCTCGCAACCCCCGACA
GAATATTCCTTGTTTCGTGCCAACCTTGCCGACACCACAACTGCTGAAGCGGAACTGACA
AAGAATCTCGATAAATCGTCGTTCCAGCAGATGGCGCCGGTGGGTCAATTCAACCTCGGG
TTCGTTATCGGTCGTCACGGAAACGATTTGTTTATTATCGACCAGCACGCCTCTGATGAA
ATATACAACTATGAAACCTTACAAGCCACACAAACCCTACAAACACAAAATCTTGTTGTA
CCGCTGAAACTACAACTCACGCCTGCTGGCAAAATTGTTTTGATCGAAAATCTTGAAATT
TTTCGCAAGAATGGATTTGGATTTAAGATTAGTTCAGATGAAGCTACCATCCACCTTACA
ACCATACCCACCCATAACCCCCACCCCCTCGGACCGCCCGATATCGATGAAATGATATTT
ATGCTCTCTGATGCCCCCGGTGTCATGTGTCGTCCAACAAGGGTTCGCCGAATCTTCGCC
ACACGAGCGTGTCGAATGTCCACAATGATAGGCACCTCGTTAACGAAGCGACAAATGTTA
CGGTTGATTCGTCACATGTCCGAGATCGTTCATCCGTGGAATTGTCCGCATGGTCGCCCA
ACCATGCGGCATCTTATCGATATCGGGAAACTTAGACAATAAAGTTTTATTATCTAACAA
TTAAACCATTGTTTTGAAACAATCGAGTTATTATTGTTATTGTTCTATCTTTGAATGTAT
ATTTTATTTTGCTTTTCTTATTTTTCCAGATTTAGGTTTTTATAATATTTCTATTTAATG
ATGTCATCGCATCGTCAATATGATGACGAGCCACACGAGGCAGTAGCGAGCATGGGGAGA
AAAGTTTGTCGGGTTTGCGACGATTTTAAAAGTTGGAGGAAAAACAAAAACGAGGAACCC
CGCAGCCCCTCGTGCCCGCTGGACCGTGAAGAGCTTGGTCGTAACACATGGTCTTTTATC
CACACGATGGCAGCATACTACCCTCGCAAACCAACAGAGCAACAACAATGCGAGATGAAA
CAATTTATTGAAAGCTTTTCAAAGTTTTATCCATGTGTGGACTGCGCTGAGGATTTAAGG
AAAAACATAAAACTGAACCCCCCAAAAGTTGGCGGACGCGTCGATTTATCTCGTTGGTTT
TGTGAACAACATAATATTGTAAACCTTAAATTGGGGAAGCAACAATTCGATTGTTCAAAA
GTTCTAGAAAGATGGAAAAATGGATGGAAGGATGGATCGTGCGATTAAGCATTGTGACGT
CATATACTTGTTTATTATGACGTCATAATTAATTTAATATAATCACTTTTTGACAATAAA
TTTTGTGACATCGCAAACATTTTTTGATATTAAAAACATGACGTCATACATATTTGATTC
ATTGGTAAGTCACAATACTGCAATGAAATCTTTTGAACTCCCCAAAAAATTAATAAAAAA
CTTTTAATTTTGTTATTTATGGCTTGCCGGGTTCGGTATATAAGCTGTTTGCCGCCGCAA
GTGGCCACTCATGTTGTAGGGTGTGCCAG

InterProScan

Gene3D
HATPase_C_sf (IPR036890) - T[1-221] 4.9E-75
TIGRFAM
DNA_mismatch_repair_fam (IPR002099) - T[5-332] 2.0E-90
SUPERFAMILY
HATPase_C_sf (IPR036890) - T[19-218] 1.19E-47
CDD
HATPase_C (IPR003594) - T[28-103] 5.85157E-5
ProSitePatterns
DNA_mismatch_repair_CS (IPR014762) - T[95-101] .
SUPERFAMILY
Ribosomal_S5_D2-typ_fold (IPR020568) - T[199-352] 6.07E-34
SMART
DNA_mismatch_repair_C (IPR013507) - T[217-353] 3.2E-43
Gene3D
Ribosomal_S5_D2-typ_fold_subgr (IPR014721) - T[222-353] 7.7E-43
Pfam
DNA_mismatch_repair_C (IPR013507) - T[247-352] 1.3E-24
SUPERFAMILY
MutL_C_sf (IPR037198) - T[650-825] 4.05E-26
SMART
MutL_C (IPR014790) - T[653-794] 6.5E-35
Pfam
MutL_C (IPR014790) - T[654-794] 6.6E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PMS2_HUMAN 51.989 % 397 2.75E-125
PM2P1_HUMAN 59.524 % 199 2.65E-56
PM2P2_HUMAN 56.805 % 191 6.1E-55