Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L172.8.v1.A.nonSL6-1

Possible name(s)

MLH1; PMS1; PMS2

Gene model

KH2012:KH.L172.8

Location

KhL172 [43,254 / 44,375]

Sequences

Amino acid sequence

Length: 152

>KH.L172.8.v1.A.nonSL6-1
HRQYDDEPHEAVASMGRKVCRVCDDFKSWRKNKNEEPRSPSCPLDREELGRNTWSFIHTM
AAYYPRKPTEQQQCEMKQFIESFSKFYPCVDCAEDLRKNIKLNPPKVGGRVDLSRWFCEQ
HNIVNLKLGKQQFDCSKVLERWKNGWKDGSCD

Nucleotide sequence

Length: 742

>KH2012:KH.L172.8.v1.A.nonSL6-1
CGCATCGTCAATATGATGACGAGCCACACGAGGCAGTAGCGAGCATGGGGAGAAAAGTTT
GTCGGGTTTGCGACGATTTTAAAAGTTGGAGGAAAAACAAAAACGAGGAACCCCGCAGCC
CCTCGTGCCCGCTGGACCGTGAAGAGCTTGGTCGTAACACATGGTCTTTTATCCACACGA
TGGCAGCATACTACCCTCGCAAACCAACAGAGCAACAACAATGCGAGATGAAACAATTTA
TTGAAAGCTTTTCAAAGTTTTATCCATGTGTGGACTGCGCTGAGGATTTAAGGAAAAACA
TAAAACTGAACCCCCCAAAAGTTGGCGGACGCGTCGATTTATCTCGTTGGTTTTGTGAAC
AACATAATATTGTAAACCTTAAATTGGGGAAGCAACAATTCGATTGTTCAAAAGTTCTAG
AAAGATGGAAAAATGGATGGAAGGATGGATCGTGCGATTAAGCATTGTGACGTCATATAC
TTGTTTATTATGACGTCATAATTAATTTAATATAATCACTTTTTGACAATAAATTTTGTG
ACATCGCAAACATTTTTTGATATTAAAAACATGACGTCATACATATTTGATTCATTGGTA
AGTCACAATACTGCAATGAAATCTTTTGAACTCCCCAAAAAATTAATAAAAAACTTTTAA
TTTTGTTATTTATGGCTTGCCGGGTTCGGTATATAAGCTGTTTGCCGCCGCAAGTGGCCA
CTCATGTTGTAGGGTGTGCCAG

InterProScan

Gene3D	ERV/ALR_sulphydryl_oxid_sf (IPR036774) - T[28-152] 4.0E-52
SUPERFAMILY	ERV/ALR_sulphydryl_oxid_sf (IPR036774) - T[42-151] 1.05E-40
ProSiteProfiles	ERV/ALR_sulphydryl_oxidase (IPR017905) - T[42-142] 29.188
Pfam	ERV/ALR_sulphydryl_oxidase (IPR017905) - T[51-143] 9.1E-26

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ALR_HUMAN	56.522 %	162	1.54E-51