- Transcript 'Haaura.CG.MTP2014.S7...' >
- Transcript 'KH2012:KH.L153.116.v...' >
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- Transcript 'KH2012:KH.L153.117.v...'
Transcript Model
Transcript Id
KH2012:KH.L153.117.v1.A.SL1-1
Possible name(s)
ZNF25; ZNF345; ZNF570
Gene model
Location
KhL153 [87,295 / 88,621]
Amino acid sequence
Length: 303
>KH.L153.117.v1.A.SL1-1
KMSKVTLKSVPKKSSGQTKEKINQCKYCDKVYDYPALLVVHLRTHTGEKPFKCDICEKAF
HSLTLMKCHKIIHSDEMPYECETCQKKFRTVKAINKHIKLHVEDKPYKCDICDKSFTSNS
NMYRHMFIHYRDKPCECKLCGKGFTRNKELKAHYSEHKNMKPFKCDKCDKAYFQEAGLTV
HKFTHTGEKPYKCNYCEKSFTSNGLLKNHHRTHTGEKPFKCAYCEKSFAANRSLRSHETI
HTGEKAFQCKYCDKLFSLSGNLMMHQRMHTGEKPFQCKICDKRFGHKGNLNQHEKTHLPS
PVS
Nucleotide sequence
Length: 1,326
>KH2012:KH.L153.117.v1.A.SL1-1
GGATTAATTTACCAATTTAGACTTTCATTCATTTACTTTTAACTGTTAGGCAAAATTTAA
AAAATGTCTAAAGTCACTTTAAAGTCAGTGCCAAAGAAATCTAGTGGACAAACTAAAGAG
AAAATTAACCAGTGCAAGTATTGTGACAAAGTGTATGATTACCCTGCATTACTTGTTGTT
CACTTGAGGACACATACTGGAGAAAAACCTTTCAAGTGCGATATTTGCGAAAAAGCTTTT
CATAGTCTTACACTTATGAAATGTCACAAGATTATTCATTCAGATGAAATGCCATACGAA
TGTGAAACATGTCAAAAAAAATTCCGCACTGTTAAAGCTATAAACAAGCATATCAAATTA
CACGTGGAAGACAAACCATACAAATGTGATATTTGTGACAAGTCTTTTACCAGTAACTCG
AACATGTATAGACACATGTTCATTCATTATAGAGATAAACCCTGTGAGTGTAAACTGTGT
GGAAAGGGTTTCACACGAAACAAAGAGTTAAAAGCACATTATTCTGAACATAAGAATATG
AAACCATTTAAGTGTGATAAATGTGACAAAGCATATTTTCAAGAAGCTGGTCTGACAGTT
CACAAATTCACTCATACTGGTGAAAAGCCCTACAAATGCAACTATTGTGAAAAATCGTTT
ACTTCAAATGGTCTCTTAAAAAATCACCATAGAACCCACACTGGTGAGAAGCCATTCAAG
TGTGCCTATTGTGAAAAATCATTTGCAGCAAATCGCTCCTTAAGAAGCCACGAAACAATT
CACACTGGAGAGAAGGCATTTCAATGTAAATATTGTGACAAATTGTTTTCTCTAAGTGGT
AACCTAATGATGCACCAAAGAATGCACACAGGTGAAAAGCCATTTCAATGCAAAATTTGT
GATAAAAGGTTTGGACACAAAGGAAATCTAAACCAGCACGAGAAGACGCATTTACCGAGC
CCTGTGTCATAAATATAACTAAACTTTGCCTGTAAAATTTCAACCAGTTTTTGTCCTGAA
AAGCCAACTGACAATTTAAATACTTGGCCTATATGTTTTTAAGACAAGTTTTCAGCCCCA
GTTAGTGACATTATTTGATAGTCCAGTTTTAACTAATCATTTAATTTTTTTGACAAATTT
TTAGATAGTTTTTATCTTGCCAATCCAACTTATTGACCAATTAATTACTTGCCTTAATTT
ATGTGTTTTAAAGACAAGTTTTCATGCACTAATTAGTGACATTATTTGACAATCAAGTTT
TAACTAATCATTTAATCTTTTTCATAATTTTTAAAAACGCAATTAATCATGTACATTTAT
TTGCAG
| SMART |
Znf_C2H2_type (IPR013087) - T[23-45] 0.091 - T[51-73] 0.71 - T[79-101] 0.0027 - T[107-129] 9.6E-5 - T[135-157] 0.13 - T[163-185] 0.13 - T[191-213] 9.7E-4 - T[219-241] 0.057 - T[247-269] 0.0054 - T[275-297] 1.8E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[23-50] 13.318 - T[51-78] 11.988 - T[79-106] 13.193 - T[107-134] 14.253 - T[135-162] 12.3 - T[163-190] 14.669 - T[191-218] 16.706 - T[219-246] 14.42 - T[247-274] 16.29 - T[275-297] 11.635 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[25-45] . - T[53-73] . - T[81-101] . - T[109-129] . - T[135-157] . - T[165-185] . - T[193-213] . - T[221-241] . - T[249-269] . - T[277-297] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[32-88] 3.3E-18 - T[88-144] 1.84E-17 - T[144-200] 5.14E-17 - T[199-256] 1.9E-19 - T[241-293] 2.35E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN345_HUMAN | 43.929 % | 252 | 8.42E-81 |
| ZN888_HUMAN | 45.714 % | 261 | 6.86E-82 |
| ZNF25_HUMAN | 45.357 % | 254 | 5.97E-82 |