- Transcript 'Boleac.CG.SB_v3.S0.g...' >
- Transcript 'KH2012:KH.L153.115.v...'
Transcript Model
Transcript Id
KH2012:KH.L153.115.v1.A.SL1-1
Possible name(s)
ZNF227; ZNF235; ZNF570
Gene model
Location
KhL153 [88,621 / 90,214]
Amino acid sequence
Length: 331
>KH.L153.115.v1.A.SL1-1
KMSEVSSKSVPKKSNGKAKSKDNCCEYCDKVYKYPSLLVAHLRKHTGEKPFKCDVCGKSF
HTPAILKNHKRFHKEKKQFKCLKCEKSFHYISHLHAHEKVHTEEKPHKCEICDKNFKAKA
SLYRHMFIHYREKPYECKLCGKGFTDHKDFKIHYSGHNNIKQFKCNKCDKAYARQTELKV
HQRVHTGERPYTCNICDKSFSTNGVLKNHQIVHTGEKPFKCEICDKSFALYSTLSHHQAV
HNGERPYKCNICDKSFATNRNLKVHHLVHTGEKPFKCDICDKSFTANGTLKNHQRVHTGE
KPFQCKTCKKRFSDKGHMRRHEKIHLPKPAA
Nucleotide sequence
Length: 1,593
>KH2012:KH.L153.115.v1.A.SL1-1
GAGTTAGTTCCCTATTTAAACTAGTATTAGTTTTTTCTTAACTGTTAAACAAATTTTGAA
AAATGTCTGAAGTCAGTTCAAAGTCAGTGCCAAAGAAATCTAATGGTAAGGCTAAATCAA
AAGATAATTGCTGTGAATACTGTGACAAGGTGTATAAATATCCTTCCCTGCTTGTTGCTC
ACTTAAGAAAGCATACTGGAGAAAAACCTTTTAAGTGCGATGTCTGTGGAAAAAGTTTTC
ATACACCCGCAATTCTGAAAAATCACAAGAGATTTCATAAAGAAAAAAAGCAATTCAAAT
GCTTGAAATGTGAAAAATCATTCCACTATATTTCTCATCTACATGCACATGAAAAGGTAC
ATACAGAAGAGAAACCACACAAGTGTGAAATATGCGACAAAAACTTTAAGGCAAAAGCGA
GCTTGTATAGACATATGTTTATTCATTATAGGGAAAAACCTTATGAGTGTAAACTGTGCG
GAAAGGGTTTCACGGACCATAAAGATTTTAAAATACATTATTCCGGTCACAACAACATTA
AACAATTCAAGTGTAATAAATGTGATAAAGCCTATGCTCGGCAGACTGAATTAAAAGTTC
ACCAGCGTGTTCATACAGGAGAAAGACCATACACATGCAACATATGTGATAAATCGTTTT
CTACAAATGGTGTCTTAAAGAATCACCAAATCGTTCACACTGGCGAAAAGCCATTTAAAT
GCGAAATCTGTGATAAATCATTCGCTTTATATAGTACTTTAAGTCATCACCAAGCAGTTC
ACAATGGTGAGAGACCGTACAAATGCAACATTTGTGATAAATCGTTTGCTACAAATCGTA
ACTTAAAGGTTCACCATTTGGTTCACACTGGTGAGAAACCATTCAAATGTGACATTTGTG
ACAAATCGTTTACTGCAAATGGTACATTAAAGAACCACCAAAGAGTTCACACTGGAGAGA
AGCCATTTCAATGCAAAACTTGCAAGAAACGTTTTTCAGATAAAGGACATATGAGAAGGC
ATGAAAAGATACATTTACCTAAACCTGCAGCATAAATAGGCTCTTTAGCACAGTTGGTTA
GCGCGCCTACCTCTAACCAAGATGTAATCGGTTCAAGGCCCAACGCTGCTACCATTGCAG
ACGTACGTGTCCTTGAGTAGGACACTGAGCGACAATTGCTTCAACCCAGTGGTCACTAAT
AGTTTATCTAAATCATCAGCCGCACATAAAAAAATTACTGAAAAAGTAACATACTTGGTA
ACTCGTAAGCTGGCACAAGGTGTATGAAACAAAACAACGGTGTTTAATGACTGCGGTTTT
CTGGCCACGCATGGAAAAAGTATTTTTACATTTATTTTATAAAACTGACTTTTGCTACCA
AAATTATTCTATGTCGAATTAGTTCATATATTATGACAATGTGTATACACTATATATACT
TGTCTTTAATTGTATTTTTATTTGTCTTCAATTGTATTTTATTGACAAATTTACCAACAA
TGATGTTTCGACAATATTTTCCATAGTTATTACATTGTCAAATTTTATAAATCATTTAAG
ATTTTAGTTAATTAAACAAAATTACTTTTGCAG
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[23-50] 12.882 - T[51-78] 13.297 - T[79-106] 14.96 - T[107-134] 13.568 - T[135-162] 11.198 - T[163-190] 16.81 - T[191-218] 15.791 - T[219-246] 15.251 - T[247-274] 15.916 - T[275-302] 17.101 - T[303-330] 11.801 |
| SMART |
Znf_C2H2_type (IPR013087) - T[23-45] 0.38 - T[51-73] 0.0035 - T[79-101] 3.4 - T[107-129] 0.0037 - T[135-157] 0.01 - T[163-185] 0.0011 - T[191-213] 4.0E-4 - T[219-241] 0.0077 - T[247-269] 7.7E-4 - T[275-297] 4.1E-4 - T[303-325] 0.0014 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[24-73] 1.74E-15 - T[76-110] 3.17E-8 - T[101-153] 1.25E-16 - T[172-228] 2.23E-23 - T[227-284] 1.06E-21 - T[269-321] 4.12E-19 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[24-45] . - T[53-73] . - T[81-101] . - T[109-129] . - T[137-157] . - T[165-185] . - T[193-213] . - T[221-241] . - T[249-269] . - T[277-297] . - T[305-325] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN227_HUMAN | 48.173 % | 299 | 3.53E-95 |
| ZN235_HUMAN | 49.502 % | 301 | 8.05E-97 |
| ZN570_HUMAN | 47.02 % | 298 | 1.38E-97 |