- Transcript 'KH2012:KH.L152.23.v1...'
Transcript Model
Transcript Id
KH2012:KH.L152.23.v1.A.SL2-1
Possible name(s)
ZNF235; ZNF583; ZNF782
Gene model
Location
KhL152 [179,469 / 180,804]
Amino acid sequence
Length: 302
>KH.L152.23.v1.A.SL2-1
RMSNVTSKSMSKKFCEKNEEKGNCCKYCDKVFRFPSKLVIHLRTHTGEKLFQCDICDKSF
TINGSLRRHQKVHTGENPYTCNICDKPFTTTNRLNTHQRIHTGEKPYKCAFCDKSFSESG
SLRCHQRVHTGEKPYKCDICERTFSENGSLRSHQRVHTGEKPYKCDICDKSFVQQCHLRR
HQRVHTGEKPYKCDICEKSFVQSGNLKTHQRVHTGEKPYKCDICGKSFSDGSILRSHQRT
HTGEKLHKCNICKKCFGENSKLRRHQRVHIGEKPYKCDICEISFVQSCNLRRHQGIHGEK
PC
Nucleotide sequence
Length: 1,335
>KH2012:KH.L152.23.v1.A.SL2-1
GTCTTGAGTATTAAATTACAGGTGTTATCTAAACCTTCTTTGATTTGCTGTGTATCGTGG
TGTATTTCATTTTAAACTTAAGGATTTTGTAATAACTCCAACAATTAAGTGTCAAGCGAA
GTTGTAAAGAATGTCAAACGTCACTTCAAAGTCAATGTCAAAGAAATTCTGTGAAAAAAA
TGAAGAAAAAGGTAATTGCTGCAAATACTGCGACAAAGTATTTCGTTTTCCTTCAAAGCT
TGTTATTCACTTGAGAACACATACTGGAGAAAAACTTTTTCAATGCGATATTTGTGACAA
ATCATTTACAATAAATGGTAGCTTAAGACGTCACCAAAAAGTCCACACTGGTGAGAACCC
ATACACGTGCAATATTTGTGACAAACCGTTTACTACAACTAATAGATTAAACACTCACCA
AAGAATTCACACTGGTGAGAAGCCTTACAAATGCGCCTTTTGTGACAAATCTTTTTCTGA
AAGTGGTAGCTTAAGATGCCACCAAAGGGTCCACACTGGTGAGAAGCCATACAAATGCGA
CATTTGTGAAAGGACGTTTTCTGAAAATGGTAGCTTAAGAAGCCACCAGAGAGTTCACAC
TGGTGAGAAGCCATACAAATGCGACATCTGTGACAAATCGTTTGTTCAACAATGTCATTT
AAGAAGGCACCAAAGGGTTCACACTGGTGAGAAGCCTTACAAATGCGACATTTGTGAAAA
ATCTTTTGTTCAAAGTGGTAACCTAAAAACCCACCAAAGGGTTCACACTGGTGAGAAGCC
ATACAAGTGCGACATTTGTGGAAAATCGTTTTCTGATGGCAGCATCTTAAGAAGTCATCA
AAGAACCCACACTGGTGAGAAGCTACACAAATGCAACATTTGTAAAAAATGTTTCGGTGA
AAATAGTAAATTAAGAAGACACCAACGAGTTCACATTGGTGAAAAGCCATACAAATGCGA
CATTTGTGAAATATCGTTTGTTCAAAGTTGTAACTTAAGAAGGCATCAAGGAATTCATGG
TGAGAAGCCATGTTAATGCAAAACTAGTATGAAAAATCTTAAATATCGAGAAAATATGAA
CAGCAGTAAAAGATGCATTTACCCGAAACCAAGACAAGAATATACTGCAGTTTTACCAGC
TAAATTCATCCTGTACTTTTCTAACCACTACCTTACCTTATTTTGTTTTTCTGCCAAATG
TTCATGTAATGGTGTGGTGACGGTTTTTGTTACAAGCTTAATATGTTGTTACATTTTTAA
TATTTGTTTTGTTAATTCAATGTGAAATTAGTTTTATTTTTTGTTGGTTTTAATATTTTA
TTTCAGATCATGTAG
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[23-50] 12.466 - T[51-78] 16.29 - T[79-106] 16.685 - T[107-134] 16.955 - T[135-162] 17.225 - T[163-190] 17.62 - T[191-218] 17.433 - T[219-246] 16.352 - T[247-274] 15.667 - T[275-297] 10.388 |
| SMART |
Znf_C2H2_type (IPR013087) - T[23-45] 0.35 - T[51-73] 2.7E-4 - T[79-101] 6.0E-4 - T[107-129] 0.0058 - T[135-157] 3.1E-4 - T[163-185] 4.7E-4 - T[191-213] 1.7E-4 - T[219-241] 5.3E-4 - T[247-269] 0.022 - T[275-297] 0.0092 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[24-45] . - T[53-73] . - T[81-101] . - T[109-129] . - T[137-157] . - T[165-185] . - T[193-213] . - T[221-241] . - T[249-269] . - T[277-297] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[31-88] 8.44E-23 - T[88-144] 1.7E-22 - T[143-200] 2.87E-24 - T[199-256] 2.44E-23 - T[241-293] 2.21E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN782_HUMAN | 56.184 % | 313 | 2.87E-102 |
| ZN235_HUMAN | 57.597 % | 321 | 1.01E-104 |
| ZN583_HUMAN | 53.357 % | 313 | 9.79E-104 |