- Transcript 'Moocul.CG.ELv1_2.S99...' >
- Transcript 'Boleac.CG.SB_v3.S135...' >
- Transcript 'Moocci.CG.ELv1_2.S19...' >
- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'KH2012:KH.L149.18.v2...'
Transcript Model
Transcript Id
KH2012:KH.L149.18.v2.A.SL2-1
Possible name(s)
DAW1; WDR3; WDR5
Gene model
Location
KhL149 [104,084 / 123,480]
Amino acid sequence
Length: 820
>KH.L149.18.v2.A.SL2-1
DTEVVVWDLVNESGLYRLKGHKGIITDCYFVKQRNMLITSSKDTYVKWWDLDTQHCFKTM
VGHRSEVWSFCLTPDERRIITGSGDSELRIWSVEFIANKDSMEAPLVKLQKTKLDDVTSD
DVTSDDVISDDVMQGIEDDLEERLVSCIKVGSVMRKGRDRVVTLKVSKDGRLLTCHGNDK
MVEFFRIFDEAEVALRIKKKLKRAKKKQKNEGQEENDITIERSIEDEISHVGSFTCAGKL
SSLDLTAPTPNTYNTVALLRNNQIETVSTISLLSQPEYSSLKRLSQLGHRTDTKSICFTM
DGMALLTTSSESAKLWNRSSHQCIRTLKCSHPKCCLFVPGDRQVILGTQEGALELHDVAS
GTLLETIQAHEGAVSCVALFPNKRGIVSGGPDKKIKFWEFDLISDENYSVSSKRVSLTHT
RTFELDDQILDVEFTPNNRFIAASLLDCSVKIFYVDSLKFFLSLYGHSLPPSCVSISSDS
TLIVSGSPDRNVKIWGLDFGDCHRSLFAHDNDVTGLKFVPDTHLFFSCGKDGLVKQWDAD
NFTLIQVLQGHLGPVWSLCVSTDGDHVATCGNDRSLRLWNRSMEVVIPDEEREHEREKEE
EKLLAKNQDTTVAGESKENEVGMATKTTVESVRGAEKIMEAIELFNEEKVKEEEFKFINK
NKDVFYKSDHPILRAYGNITATRYVLEVIRKIRSSELEESLLVLPFSYVPDLLQLLGTFV
ARGREVELACRCIFFLLRIHHGRITTNQTLVNVLDDLRHNTETKIDQLRNTIGFNLAALG
HIRRQFESKNDVTFFSDATQRANDKKKRRKRTTQRAVLTT
Nucleotide sequence
Length: 3,376
>KH2012:KH.L149.18.v2.A.SL2-1
GATACAGAAGTAGTAGTTTGGGACTTAGTGAATGAAAGTGGATTGTATCGTTTGAAAGGA
CACAAAGGAATCATAACTGATTGTTATTTCGTCAAGCAACGAAACATGTTAATTACCAGT
TCCAAAGACACATATGTGAAATGGTGGGACTTAGATACTCAGCATTGCTTTAAAACAATG
GTTGGACACAGATCCGAGGTTTGGTCATTTTGTTTGACACCAGACGAGCGCCGAATTATA
ACGGGGTCAGGGGACAGTGAGTTACGTATATGGAGCGTGGAATTTATTGCTAACAAGGAC
TCTATGGAAGCACCTTTAGTTAAGCTACAGAAGACAAAACTTGATGATGTCACTAGCGAT
GATGTCACCAGTGATGATGTCATAAGTGATGATGTCATGCAAGGCATTGAAGACGACCTT
GAAGAACGATTGGTCAGTTGTATTAAAGTGGGGTCGGTCATGCGTAAAGGTCGTGACAGG
GTCGTGACCCTCAAAGTTTCAAAAGACGGAAGATTACTCACGTGCCATGGAAATGACAAA
ATGGTCGAATTCTTTCGCATTTTCGATGAAGCGGAAGTGGCTCTGAGGATAAAAAAGAAA
CTAAAAAGAGCAAAGAAGAAACAAAAGAATGAGGGACAAGAGGAAAATGATATCACAATA
GAACGAAGTATTGAAGATGAAATAAGTCATGTTGGTAGCTTTACCTGTGCTGGCAAGTTA
AGCTCATTGGACCTTACCGCACCGACCCCAAACACTTACAACACTGTCGCATTATTACGT
AACAATCAGATCGAGACAGTATCCACAATCTCTCTGCTGTCCCAACCGGAATATTCCAGT
TTAAAGCGGTTATCTCAGCTTGGTCATCGTACAGACACAAAATCAATTTGTTTTACTATG
GATGGTATGGCTTTATTAACAACATCTTCTGAAAGTGCGAAGTTATGGAACAGGAGTAGT
CACCAGTGTATACGAACATTGAAATGCTCCCACCCTAAATGTTGTCTTTTCGTTCCGGGT
GATCGGCAAGTTATTTTAGGAACACAAGAGGGAGCATTAGAGCTGCACGATGTCGCTTCA
GGAACGCTACTGGAAACCATCCAGGCACACGAGGGTGCTGTTTCATGCGTTGCGTTATTT
CCAAACAAGCGAGGAATTGTATCCGGGGGCCCGGATAAAAAAATTAAGTTCTGGGAATTT
GATTTAATAAGTGATGAAAATTATTCAGTGAGTTCAAAGCGAGTATCTTTAACCCACACT
CGGACTTTCGAGTTAGATGACCAAATTCTTGACGTTGAATTTACCCCGAATAATCGTTTT
ATTGCCGCGTCATTATTGGATTGTTCCGTCAAAATATTTTACGTGGATTCTTTGAAGTTT
TTTCTCTCGTTATACGGACACTCTCTTCCCCCCTCTTGTGTGAGCATTAGTTCAGATTCA
ACGCTGATTGTTTCCGGGTCACCAGACCGGAACGTTAAAATATGGGGTCTGGATTTTGGT
GACTGTCATAGGTCATTATTTGCGCATGATAACGACGTTACTGGATTAAAATTCGTGCCC
GATACTCACCTGTTCTTCAGCTGTGGTAAGGATGGTTTAGTTAAGCAATGGGATGCAGAC
AATTTCACACTGATTCAAGTCTTGCAGGGCCACTTGGGTCCAGTATGGTCACTATGTGTC
AGTACCGATGGTGACCATGTTGCTACTTGTGGAAATGATCGCTCACTAAGATTATGGAAT
CGATCCATGGAAGTGGTCATCCCTGATGAGGAGAGGGAGCATGAAAGAGAAAAGGAAGAG
GAAAAATTGCTCGCCAAGAACCAAGACACTACAGTGGCAGGAGAGAGCAAGGAAAATGAG
GTTGGCATGGCAACCAAGACAACAGTTGAAAGTGTGAGGGGTGCTGAGAAAATAATGGAG
GCAATTGAGTTATTTAATGAAGAGAAAGTAAAAGAAGAAGAATTTAAATTCATCAACAAA
AACAAAGATGTATTTTACAAATCTGATCATCCTATACTAAGGGCATACGGCAATATTACG
GCTACGAGATATGTTTTAGAAGTCATACGAAAGATTCGCTCAAGTGAATTAGAAGAGTCG
TTACTTGTCCTCCCATTTTCTTACGTCCCCGATCTGCTGCAATTACTCGGTACCTTCGTC
GCTAGAGGGCGTGAAGTAGAGCTAGCTTGCCGTTGTATATTTTTCCTTTTAAGAATTCAC
CACGGCCGAATAACGACCAATCAGACGCTAGTGAATGTTCTGGACGATTTACGTCATAAT
ACAGAAACAAAGATCGACCAATTACGTAACACCATCGGTTTTAACTTGGCTGCTCTGGGT
CACATACGTCGTCAATTCGAATCCAAGAATGACGTCACGTTTTTCTCCGACGCCACACAG
CGGGCAAACGATAAGAAGAAACGACGCAAGCGTACTACACAGCGTGCAGTTCTAACCACG
TAATACAGGAATAAATGGTCTTAAACACAACCAAGTTATGATACAGTAGTTCCAGGTTAT
TTTAACATCATAGGCTTAATCTAAACTAAAGATACATCATTGTAGGCTAGACTTAGATTC
GATATAGGCTAAATCTATATTTAATTTTAATCCTATGTTAAAGCTAAACTTATATAAAAA
AAAACTAAGTTTCTTTCTATTCTAACCAGTATTTAGAAATGTTCAGTTTCAGAAATTCAA
GCAAAAACAGATCAGATAAAAGGTCTACTGAACTGAAGCTATTAAAGTACAAGCATTCAT
AGTTCAGATCCCAGACAAGCCAGTTAGAATGAAATATTGAGAAAGGCAACTTCTAATAAA
GAAAAATAAGTCCAAAGATTTGTCAAAAGAAGAAGTGGAATCATTGTTTAAAGACGACTT
AAAAAAATATTTGTTTTTCTTTTGTGTAAAATCGCATTTTATGGCTATTTTGTATTTGCA
ATTGTTGTTTTTGTTTACGATGTTTCGGCTTTTCTATATTCGTGAGTCGCAAGCGCATAT
ATACTTAACAGTGGGCATAAAGAACTTTGGCAAAATTCGGAGATTTCTAGAACGAAGTGG
TGCCAACTGTTAAAAGAATTTAATTACAATCTGATAGCTTATTTAATTTACAGGTAAAGT
TTTTGTTGATTTCGTTTTTGCAGGTAAATTGCCGTGACCTACTGTACCACTCACCTAGCT
AAACAGCGGCAACATTCTATGTCGTTTTTGCAGCATAACATGTATGCATTCAAAACTATC
AGATTACGGGTCAAAGGTGTGTTCCTCTACGTCAAAATTCCCACGAAAACTCTAATAATT
GTGTTCAAAACATTACTAAACCGAGATTATTACTGAGTGTATCATTTTATCACCATTTTG
GGTGAGGTTTCAAAAT
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[1-589] 39.812 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-216] 2.0E-29 - T[250-461] 4.7E-25 - T[462-658] 9.6E-40 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[2-94] 3.66E-24 - T[141-189] 3.66E-24 - T[285-581] 1.92E-61 |
| SMART |
WD40_repeat (IPR001680) - T[11-50] 2.3E-4 - T[53-92] 5.7E-8 - T[147-186] 200.0 - T[277-317] 7.9 - T[320-357] 43.0 - T[360-399] 4.7E-8 - T[416-454] 0.85 - T[457-496] 1.9E-6 - T[499-538] 2.5E-7 - T[541-580] 1.4E-10 |
| Pfam |
WD40_repeat (IPR001680) - T[15-50] 0.013 - T[55-92] 1.7E-4 - T[363-398] 0.0032 - T[463-495] 7.9E-4 - T[500-538] 1.5E-5 - T[544-580] 6.7E-8 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[18-59] 12.012 - T[60-94] 13.382 - T[367-401] 12.514 - T[464-505] 12.514 - T[506-547] 12.514 - T[548-580] 12.38 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[79-93] 3.2E-5 - T[386-400] 3.2E-5 - T[483-497] 3.2E-5 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[386-400] . |
| Pfam |
SSU_processome_Utp12 (IPR007148) - T[683-782] 3.7E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRP4_HUMAN | 26.502 % | 94.4 | 4.15E-20 |
| WDR3_HUMAN | 50.807 % | 805 | 0 |
| PRP17_HUMAN | 27.273 % | 92.4 | 2.3E-19 |