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TRANSCRIPT CARD

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  1. Gene 'Cisavi.CG.ENS81.R5.1...'
  2. Transcript 'KH2012:KH.L141.66.v1...'

Transcript Model

Transcript Id

KH2012:KH.L141.66.v1.A.SL1-1

Possible name(s)

LCMT1; LCMT2

Location

KhL141 [115,515 / 120,743]

Sequences

Amino acid sequence

Length: 310

>KH.L141.66.v1.A.SL1-1
MSHSSDVAIQSTCDDASMCKRYAVSRGYWKDEYINFMVHRSTSRKQPEISRGYYARTEAI
WKLLVQFVSVTERRCQIVSLGAGLDTTYWRLHAAGLTPYGYFEVDFIDVVARKMRCIGRN
PALRSCLPNIETQRDESYLHCGPYRLLSCDIRDTLKLEEQLVNAEIDLSYPTLFLTECVL
IYMAPDKSNKIIKWASDKFKDCVFINYEQVNMNDAFAQVMISNLKLRQCWLDGAGACENK
QVQLERFVHNGWPKVVCDDMWTIYNRLPERQRIERLEMLDESELLQQLLQHYCLVIAVKD
TSDIGLEILI

Nucleotide sequence

Length: 1,641

>KH2012:KH.L141.66.v1.A.SL1-1
TAAAAGTAAACAAAGAATATTTGAATGTCTCATAGCAGTGATGTAGCAATACAAAGTACA
TGTGATGATGCATCGATGTGCAAACGATACGCCGTCAGTCGAGGTTATTGGAAAGATGAA
TATATCAATTTCATGGTTCATAGATCAACATCACGCAAACAGCCAGAGATAAGTAGAGGC
TACTATGCAAGAACTGAAGCCATTTGGAAGTTGCTTGTACAGTTTGTGTCGGTAACTGAG
CGTCGGTGTCAGATAGTAAGTCTTGGTGCAGGGCTTGACACAACTTACTGGAGATTGCAT
GCAGCAGGCCTGACTCCTTATGGATATTTTGAAGTCGATTTTATTGATGTTGTTGCAAGA
AAAATGCGATGCATTGGGAGAAACCCCGCTCTTCGTTCGTGCTTGCCAAACATTGAAACC
CAACGTGATGAAAGTTACTTACACTGCGGTCCTTATCGTTTGTTGAGCTGTGATATCAGA
GATACATTGAAACTGGAAGAACAACTTGTGAATGCTGAAATTGACCTCAGTTACCCAACC
CTGTTTCTCACTGAATGTGTTTTAATATACATGGCCCCAGACAAGTCAAACAAAATAATT
AAATGGGCTTCGGACAAATTTAAAGATTGTGTTTTCATCAACTATGAACAAGTAAACATG
AATGATGCTTTCGCTCAAGTCATGATCAGTAACTTAAAATTGCGACAATGTTGGCTAGAT
GGGGCTGGTGCTTGTGAGAATAAACAAGTTCAGTTGGAAAGATTTGTTCATAATGGTTGG
CCAAAAGTTGTTTGCGACGACATGTGGACGATATATAACAGATTACCCGAGCGCCAGAGA
ATCGAGAGATTGGAAATGCTGGATGAAAGTGAATTACTGCAACAACTGCTACAACACTAC
TGCCTAGTTATTGCTGTGAAAGACACATCTGATATTGGTTTAGAAATACTGATATGAAGT
TGTTTGAATGTTACACGCACTGTGATTCTATTAATAAGTTGATGTGTGATAACATTACGT
TGTTTTGATTCTTTTTTATCATGTTTCAAATTTTCTTTCTGCACATTTATTGTTTTAGGT
GTAGAATTTTCTGCCAAATATATTTGATTTTTCAAAGTTCCTTTTTGCTTTACACCTATC
CTGTGTAGCGATCTGCGTTACTTGTTTTTCATACTTGATGTTTATGTCAGTGGACAGAGT
TAACATGTTAGTGGACAGACTTCACGGTGATTCTTAATAACAAGAGGGTAAAGCTCTAAT
GACCGGGCACGCATCATTATAAAAATAGTGGTGGGAAGTTTTGTAAACGAAACTGGCAAC
AATCTATTGTCTAGTCTTCGATGCTCGCCACGTGAAACATATATTTTGTATTTATCTTGC
TTTAATAATAGATAAGAAAAGATTAGTAACTTGCTAAATTTCCAACTCTAAATTTCCACT
GTAATGTAAACAGCCAAATTATCGATTACTTACTGCAAAGAGATTTGAACCAATCTCTTT
GCTTACTGACTGGTTTATAATAAGTGAAAGTTTACTTGGCTGGTAATGGTCATTTTGTAC
ACTCTGTTTTAAAAGATGCTTATAGTTTAAAATCGATAAGAAATAAAAAACAAGAGGGTA
AAGGTATAATAAATAGACACT

InterProScan

PIRSF
Leu_CO_MeTrfase_LCMT1 (IPR016651) - T[1-310] 1.7E-120
Pfam
Ppm1/Ppm2/Tcmp (IPR007213) - T[8-195] 2.0E-30
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[8-299] 7.72E-56

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TYW4_HUMAN 34.653 % 149 1.18E-40
LCMT1_HUMAN 47.097 % 294 4.47E-99