- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'KH2012:KH.C13.137.v1...' >
- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'KH2012:KH.L133.8.v1....'
Transcript Model
Transcript Id
KH2012:KH.L133.8.v1.A.SL1-1
Possible name(s)
HERC2; RCBTB1; RCBTB2
Gene model
Location
KhL133 [1,118 / 5,394]
Amino acid sequence
Length: 523
>KH.L133.8.v1.A.SL1-1
VKESYASNTMNNIPTTTTTTTTTTIHDKPPGRNIFMHNMWPLLSLLPPCLLEKINLVFTF
GQSATEVIFTTLDEKVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHV
LVLTQDGGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGE
VYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYN
GNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQLGSG
NKANTCTPLQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWGQLRQQATPEPKPTNFTD
LNAVFAGFSSPPVSWRAMIVTSEVEPSVQQSVSRAFNDETSADLKILVEGKHILVHKSIL
KIRCEYFKRMFQSHWDENNQDVIEITGYNYPVVYSFLRWLYTDQVELPTEDIIGLLDLAT
SYCENGLKHQCQKLIKESIVVENAALLYAAAIKNFKIFASSSV
Nucleotide sequence
Length: 2,004
>KH2012:KH.L133.8.v1.A.SL1-1
ATGATAAATGTAAGTAAAAGAGAGCTATGCAAGTAATACCATGAATAATATACCAACAAC
AACAACAACAACAACAACAACAACTATACATGATAAACCACCTGGAAGGAACATATTCAT
GCACAACATGTGGCCTCTGTTAAGTTTATTGCCGCCATGTTTGCTTGAAAAGATCAACCT
TGTTTTTACATTCGGACAATCGGCAACTGAGGTTATTTTCACAACACTTGATGAGAAGGT
TTACAGTCTTGGTACGAACACCAGCGGTTGTTTGGGCGTTGGAGATAATTCGTCCTCCCT
GGAACCTCGGTTGTTGGAAAGTTTTAGCGGACAGAAGATAATATCGTTGAGTGCGGGGAG
CGGTCCGCATGTGTTGGTGTTGACGCAAGATGGAGGTGTATATAGTTGGGGTCACAACAG
TTATATGCAGTTGGGTAACGGAGGAACTTCACCTGGGACTTCCCCCTCGTTATTGTCGCG
AAATATTTCAAACAAAGTCGTTCAGATTGCTTGTGGGAGTCACCACTCGATGGCACTAAC
GACTGAGGGTGAGGTTTACACTTGGGGTTACAACAACTGTGGGCAGATCGGATCGGGCTC
GACAGCGAACCAAGGATCCCCTCGTAAAGTAACGGCTTGTATCGGTAATAAAAGAATCAT
CGACATCACATGTGGCCAGACAACATCGTTGTGCGTTACTGACAGCGGAGAGGTGTATTC
ATGGGGATACAATGGTAACGGACAACTTGGTGTGGGGAATAACGTCAACCAAACCAACCC
ATGCAGAGTAGCAGCGTTGCAGGGGGTCGTTATCGCTCAGGTGGTGTGCGGATATGCACA
TGCCCTCGCACTCACCGATAATGGAGTTGTATTTGGATGGGGCGCCAACAGTTACGGACA
ACTTGGGTCTGGCAACAAAGCCAATACGTGCACCCCACTGCAGGTAGCCACACGCATAGG
AAGGGTGGTGTGTTTGGCTGCCACACATTATTCACATTCATCTGCTGCAAGGAACCAAAG
TGGGCATATATACATGTGGGGCCAACTCCGTCAGCAAGCGACCCCGGAACCGAAGCCAAC
AAACTTCACCGATTTAAACGCTGTGTTTGCCGGGTTCAGTTCGCCTCCTGTTAGTTGGAG
AGCGATGATCGTAACCAGCGAAGTGGAACCATCTGTGCAGCAGAGCGTGTCGCGTGCATT
CAACGACGAAACTTCGGCAGATCTTAAAATTTTGGTCGAAGGGAAACATATATTAGTTCA
TAAATCAATTCTTAAAATAAGGTGCGAATACTTCAAGCGAATGTTTCAGTCGCATTGGGA
TGAAAACAATCAAGACGTTATTGAAATCACTGGTTATAATTACCCCGTTGTTTATTCTTT
CCTCCGTTGGTTGTATACAGATCAAGTAGAGTTGCCGACCGAAGATATTATTGGTTTGTT
GGACCTTGCAACATCATATTGTGAGAATGGATTGAAACATCAATGTCAGAAATTGATCAA
AGAAAGCATTGTTGTTGAAAATGCGGCTCTGTTGTACGCTGCAGCCATCAAGAACTTCAA
GATTTTTGCTTCCAGTTCTGTTTAAACCACATGACCAAAGTCGTACAAACCGAAAGCTTT
AAATTATTGGACAAAGAAGTTTTGTACGAGTTGGTGTTGGAAGCGTCCAAGCATGGGGCT
TTTAAACGTTGAATATTTAACTCAGCAGTATTATTATTTAAAGTTGTTCTTTATTTTAAT
GTATTTGAAAATTATAATTGCATAAAACTCTTTCAATTTATTTATGTCCTATCACTATGA
AATATATTCTTCCAATGATAACTAAACTAAATGTTGTGAAACTACTACTTATTTTAATGT
TTTATCACTTTGTTCTTTTGTTACATACAAAGCTACATCAAGCATGTTATATTAAAAACA
CAACTTCTGTTTTCTTTATATTTTTATTTGAACATGATTAGCGAGACGTTTACTTTCCCT
TTCTCGCTTTAATCTTGCGTTGGT
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[63-344] 2.79E-79 |
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[63-158] 1.0E-22 - T[160-374] 3.9E-59 |
| Pfam |
Reg_chr_condens (IPR000408) - T[74-116] 1.5E-7 - T[126-175] 7.3E-14 - T[178-228] 1.6E-11 - T[231-280] 1.7E-13 - T[283-330] 8.1E-8 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[74-126] 11.147 - T[127-178] 16.735 - T[179-231] 14.102 - T[232-283] 17.097 - T[284-335] 10.524 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[128-144] 1.8E-13 - T[162-175] 1.8E-13 - T[181-197] 1.8E-13 - T[232-248] 1.8E-13 - T[270-286] 1.8E-13 - T[286-300] 1.8E-13 |
| ProSitePatterns |
Reg_chr_condens (IPR000408) - T[165-175] . |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[385-497] 1.36E-24 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[396-498] 4.2E-20 |
| SMART |
BTB/POZ_dom (IPR000210) - T[402-499] 1.6E-19 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[402-469] 17.086 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC2_HUMAN | 34.68 % | 164 | 6.69E-43 |
| RCBT2_HUMAN | 51.368 % | 522 | 0 |
| RCBT1_HUMAN | 55.789 % | 563 | 0 |