- Transcript 'KH2012:KH.L108.14.v2...'
Transcript Model
Transcript Id
KH2012:KH.L108.14.v2.R.ND2-1
Possible name(s)
MTHFS; POLR3K; ST20-MTHFS
Gene model
Location
KhL108 [472,893 / 474,919]
Amino acid sequence
Length: 345
>KH.L108.14.v2.R.ND2-1
SPAMLLFCPTCGNLLTVEEGNQCYRFACPTCPYVHNITQKISSKKFPKLKAVDDVLGGSA
AWENVDSTEEKCPKCEHDRAYFMQIQTRSADEPMTIFYKCCSPTCGHHGGNKWCFYVSFN
GKKQILVEFENVGLHSILQIYQKSGLGDSLTIMMRAAKQALRKKVKLDLKEMTLKEKTLQ
SANITQQVLDNKWYKSATRLSIYLSMKNEVQTYDILKHAIDSNKAVFIPKYVGDNMDMVR
LHSMEDYEALPETKWFIKQPLDGDNTRENAIETGGLDLILVPGVAFTKAGGRMGHGKGYY
DTYIEKISIVKKPKLVGLAFNVQMLDEIPLSEHDQPLDDVITYKC
Nucleotide sequence
Length: 1,393
>KH2012:KH.L108.14.v2.R.ND2-1
CCTCACCCGCAATGTTGCTTTTCTGCCCAACATGTGGCAACTTGTTAACAGTTGAAGAAG
GCAACCAATGCTACAGGTTCGCATGCCCGACATGCCCATACGTGCACAATATCACACAGA
AAATCAGCAGCAAAAAGTTTCCAAAGCTCAAAGCAGTTGACGACGTGTTAGGGGGTTCAG
CTGCGTGGGAAAACGTGGATTCAACGGAAGAGAAATGTCCAAAGTGCGAACATGACCGTG
CTTACTTCATGCAGATACAAACACGATCGGCAGACGAACCGATGACGATATTTTATAAAT
GTTGTAGCCCCACGTGTGGCCATCATGGAGGGAATAAATGGTGTTTCTATGTTTCTTTCA
ATGGTAAAAAACAGATTTTGGTTGAATTCGAAAATGTGGGCCTTCACTCAATTCTACAAA
TATACCAAAAATCTGGGCTGGGGGATTCATTAACAATTATGATGCGGGCTGCTAAACAAG
CTTTAAGGAAAAAAGTAAAACTTGACTTGAAAGAAATGACTTTGAAAGAAAAAACTTTGC
AATCTGCAAATATTACTCAACAAGTTTTAGACAACAAATGGTACAAATCAGCCACTCGTT
TATCCATCTATCTAAGCATGAAGAATGAAGTGCAGACCTATGATATTCTTAAGCATGCAA
TAGATAGCAACAAAGCTGTGTTTATCCCGAAATATGTGGGCGATAACATGGACATGGTAC
GTCTGCATTCTATGGAAGATTACGAAGCATTACCCGAGACCAAGTGGTTCATAAAACAAC
CATTAGATGGCGATAACACTCGAGAAAACGCGATCGAAACCGGGGGGTTAGACCTCATCC
TTGTACCTGGAGTTGCCTTCACAAAAGCAGGGGGCAGGATGGGACACGGGAAGGGGTATT
ATGATACTTATATTGAGAAGATAAGCATAGTTAAAAAACCAAAGTTGGTTGGCTTAGCAT
TCAATGTTCAAATGCTCGACGAGATTCCTTTGTCGGAACATGATCAACCCTTGGATGATG
TCATCACTTATAAATGTTGATGATGTCATCATACAACAATATTTTTAAAATCACATATCT
AGTTTGGTTGCAATCTGGTGTTAATGACAGTGTTTTCAGTTTAAGTTTTTTCATTATAGA
AAAGCCCACTGTTTTTTATCAATTTGTTAAAAAAACATTCTTACGGTTTTTGCATTTTTT
TAACAATAGTGCCAAAGTAATTCGGTAACAATTATAAATGGTTTACATAGTTATATTTTT
CGCCACAAAATATAATTTTGTGGTTTTTATGTTTTATTTGTTTGCATACAATACAAATGT
TTTTATCTTGTTATTACATCATAATGGTGTTTGTGTTCGATTGTTTGCTAATATTAACTT
CTTCTTAATTTAG
| SMART |
DNA-dir_RNA_pol_M/15kDasu (IPR001529) - T[6-56] 4.2E-15 |
| Pfam |
DNA-dir_RNA_pol_M/15kDasu (IPR001529) - T[7-39] 1.4E-8 |
| ProSitePatterns |
DNA-dir_RNA_pol-M_15_CS (IPR019761) - T[7-31] . |
| CDD |
Zn_ribbon_RPC11_C (IPR034014) - T[64-108] 4.54749E-28 |
| ProSiteProfiles |
Znf_TFIIS (IPR001222) - T[68-114] 15.02 |
| SMART |
Znf_TFIIS (IPR001222) - T[70-115] 2.4E-16 |
| Pfam |
Znf_TFIIS (IPR001222) - T[71-108] 6.1E-18 |
| Gene3D |
FTHF_cligase-like_sf (IPR024185) - T[151-344] 2.9E-65 |
| PANTHER |
FTHF_cligase (IPR002698) - T[152-342] 2.9E-69 |
| Pfam |
FTHF_cligase (IPR002698) - T[158-342] 2.7E-47 |
| SUPERFAMILY |
NagB/RpiA_transferase-like (IPR037171) - T[158-342] 1.81E-43 |
| TIGRFAM |
FTHF_cligase (IPR002698) - T[158-342] 1.2E-40 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MTHFS_HUMAN | 41.579 % | 157 | 6.31E-47 |
| RPC10_HUMAN | 76.923 % | 191 | 4.04E-61 |
