- Molecular Tool 'citb15e8-MO (Hamada's MO)' >
- Transcript 'Moocci.CG.ELv1_2.S44...' >
- Transcript 'KH2012:KH.L10.29.v1....'
Transcript Model
Transcript Id
KH2012:KH.L10.29.v1.A.SL1-1
Possible name(s)
BTBD9; SPOP; SPOPL
Gene model
Location
KhL10 [85,585 / 89,108]
Amino acid sequence
Length: 390
>KH.L10.29.v1.A.SL1-1
WRDMQPSSPRVSSATSSRSGSPAPPNDMLGTPVAENWCYTQVKVVKFSYMWTINNFSFCR
EEMGEVLRSSTFSSGANDKMKWCLRVNPKGLDEESKDYLSLYLLLVSCHKSEVRAKFKFS
ILNSKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLMDETNGLLPDDKLTLFCEVSVVQ
DSVNISGQSNMMQLKVPECRLSKDFETLLDESHFTDCTFSVDGKEYKAHKAIVAARSPVF
RAMFEHEMEESKFNRVEISDIPHQVFKEMLNFLYTGKASKLDVMASQLLAAADKYALERL
KVMCEESLCSNLSVENVAEILILADLHNACQLKEMAIDFINNHALDVMETSGFNVMVRSH
PHLVADAFRALAAIQSPPSGPPRKRLKSSS
Nucleotide sequence
Length: 1,911
>KH2012:KH.L10.29.v1.A.SL1-1
CAGGACAAAGCAGTTAGGATATATCCATGTAACAATAGGTTTGAAAAGTTTTAAAGTAAT
AACATACAAGTTAGTGGCGTGACATGCAACCGTCGTCTCCTCGTGTTAGCTCTGCCACCT
CATCGAGGTCTGGTAGCCCAGCTCCTCCAAATGATATGCTGGGTACTCCTGTTGCAGAAA
ATTGGTGTTATACACAAGTGAAAGTTGTGAAGTTCTCGTACATGTGGACGATAAACAATT
TCAGTTTCTGCCGTGAAGAAATGGGTGAAGTGTTAAGGAGTTCCACCTTTTCTTCTGGAG
CTAACGATAAAATGAAATGGTGTTTAAGGGTAAATCCTAAAGGTTTAGATGAGGAATCAA
AGGATTATCTTTCATTATATCTATTACTTGTTTCTTGTCACAAAAGTGAAGTTCGTGCAA
AGTTCAAATTTTCTATCCTGAACAGCAAACGTGAAGAGACCAAAGCCATGGAGAGCCAAC
GTGCGTACAGATTCGTGCAAGGCAAAGACTGGGGTTTTAAAAAGTTCATCAGAAGAGATT
TTCTTATGGATGAAACCAATGGCCTGCTGCCAGATGATAAGCTAACTCTGTTTTGTGAGG
TAAGTGTTGTACAAGACTCGGTGAACATATCGGGTCAGTCCAACATGATGCAGCTTAAAG
TTCCTGAGTGTCGGTTGTCAAAAGATTTTGAAACATTATTGGATGAATCACATTTTACAG
ACTGCACGTTTTCAGTAGATGGTAAAGAATACAAAGCACACAAGGCAATTGTAGCAGCTC
GTTCCCCTGTTTTTCGTGCAATGTTTGAGCACGAAATGGAAGAAAGCAAATTTAACCGAG
TTGAAATATCTGATATACCACATCAAGTCTTTAAAGAAATGCTAAACTTTTTGTACACTG
GGAAGGCATCAAAACTTGATGTTATGGCATCTCAATTGCTAGCAGCAGCAGACAAGTATG
CTTTGGAAAGATTAAAAGTAATGTGCGAAGAATCTCTTTGTTCCAACCTCTCTGTAGAAA
ACGTAGCAGAAATTTTAATTCTTGCCGACCTACACAATGCGTGCCAACTTAAAGAGATGG
CTATTGATTTTATAAACAACCATGCACTTGATGTTATGGAAACTAGTGGCTTCAACGTCA
TGGTTCGTTCACACCCGCATTTAGTAGCTGATGCTTTCCGTGCCCTCGCTGCTATCCAGT
CACCACCATCAGGTCCTCCACGAAAAAGACTTAAATCTTCCAGTTAACACAAAGTTTAAC
CAGCTGTAGGTGCCGCTCGAACCAAGTGTTGTTTTCTTGCAAGGATTGTCTTCAAAGCAC
AGTTGTCTTGTTGATTCAGAGGAGATACATGTTTGCCACCTGACAAGCTGCTTTACACCA
ACCGTAACGAAACATGGTTGTTATAGCTTAGTTATATTTTTGACATCGAAATATTTGTTG
GTATATGTTTTTCTGCATCTTCGGTGAATAACATTTTTCCTCTTATGAAGTTTAATTTCA
TGCAACGGCTATTTCTTGTTAAAATGAAATGCAAGCTGCTAACAACATAACCAAGCTATC
CTAGCATTTGTGCAGTCTCAATTGTTGGATAAATGGTGTGCGTTTCTGTTTTGGGAGATA
TTTCTTTATACTGTGAATTGATAAGATTTTTGTTTTTCCTAATCGTTTTTTTTTTGCTTA
CTTTGTTCCATTTCGAATAGAAAACTGTATGACTTTTAGGATTCGGTTTAAAATTACGAG
AATATAATTATGTTGAAACTTATTGGTTATTAGCCCTTACCATGCTATATTTTTGGGGCT
AAACTGTTTTAAACAAAGTTTATTGTGGCGAAATATTTTGATTTCAGGTTCGGCTACTTC
TAACACAATTTTCTAATAAAGCTATGTGGGAATATAGTTTGTTTTCTTTAG
| SUPERFAMILY |
TRAF-like (IPR008974) - T[44-185] 8.99E-46 |
| Gene3D |
TRAF-like (IPR008974) - T[44-181] 3.5E-43 |
| ProSiteProfiles |
MATH/TRAF_dom (IPR002083) - T[46-176] 28.42 |
| SMART |
MATH/TRAF_dom (IPR002083) - T[51-157] 8.2E-15 |
| Pfam |
MATH/TRAF_dom (IPR002083) - T[80-176] 9.4E-7 |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[192-310] 7.33E-33 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[206-311] 4.0E-31 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[215-282] 19.403 |
| SMART |
BTB/POZ_dom (IPR000210) - T[215-312] 5.6E-28 |
| CDD |
SPOP_C (IPR034089) - T[312-373] 2.12761E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BTBD9_HUMAN | 31.847 % | 80.1 | 3.39E-16 |
| SPOP_HUMAN | 78.552 % | 585 | 0 |
| SPOPL_HUMAN | 74.169 % | 574 | 0 |