- Transcript 'KH2012:KH.C9.853.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.853.v1.A.SL1-1
Possible name(s)
TDRD1; TDRD5; TDRD7
Gene model
Location
KhC9 [6,258,762 / 6,262,863]
Amino acid sequence
Length: 1,172
>KH.C9.853.v1.A.SL1-1
INMSDLENVKKNLRSVLLSSKQGIVAKHLQREYRELNGEFIPHQKLSFCSLEEFIRSLSD
VCRVGYNNQNELTYFALTDGSTQHIKKMVANQRPGKKKSKPSSFKRNQFAQRPKSQYHHG
SGWFNAPPRFRKHNTIKTTFKQHTVHVSPNTMTINVKNPQYTSNKVAPATPAVVKSNLAN
LLKSNPAGIHSCHLARLYKETFKQELPDKFVQDILDGKLPEYARVDKISIGNETKAILLS
VNKVQTKRNMQQATNLQIMEEFVIKEHFVLEIEKNYKVSIQHVESCDQVFVQIFEDANSI
KQMQTLIKSLHPSLKTCQSSLKPGSYVTTDCFLRAKAIQVTGDEVEIYNIDVGTTYFVSL
GSLRYMNSSIASYPVFGIRCSLSRLNKGGSWSEDATKFCLKLISVGMSMIMKVVQIPTTI
LADQEYSVILYSEKPSRNLNARVLDDELSLMVARTVKFSNPFRFQPKSCAKFPNDEYLHL
FILSVLCTTEVEVCIVGEQYSYKLCQLESAMLAFYNKPENRGVLALPQPPPLNCVYAVLQ
EETCVRGKLISINGNEAEVYLVDNAAFETVAISCLHPLKYAYSQFPTQVVTVSLAGLEQP
TLANHSTILQYLSENIDNKPCVAKIVGRFGEEQDQIVVELLDTSGSVDVHVNKVCRSLVY
SPKHYPSPDTTVPVIVRHIDQDAGLIFLNISGENLTALHRGMNEIQSMISPRRSQISKLA
TDLYIGKECLACISGSYYRVVIEEFTNQKPRDVKVFLIDVGRMEYISQGALLKMASESLL
SIPPQAECCKISSPQETKEMLAAAGDFLHMNLTTAIDQLTTSESVIARFDKIESSDGGPH
CISLWIDSPMGMKTRIISDDEEGPRVDEVRDRSRSFSSTSSSLLNSPLSTNSSTPALHDS
FSSMNLVGAPKIETPDSAAKHQVYKTKDINHNTEIILSSISPNTLALAPRVNKHESPPKP
LRREDVVLPSNSLIPVRVENVISPIHFNLILLDDLQKRDHLRKTMTAFYRKRPSQSKVAL
NQINCGSVYAAAYEDDAGVGWHRVKVQSSINGQVCVYFLDYGMCDVISDTASFYRLEKGF
EILPPLSLVGRLAGIQPLDDAADWDDETCDRFTNLVINRDFYAQFFRMKLDLDDRMPDCR
VFNISLCDTKTGVDVWINDVLVDIWNCAEYVA
Nucleotide sequence
Length: 4,101
>KH2012:KH.C9.853.v1.A.SL1-1
TGCATATTAATAAGAGGTGAATAAACATGTCAGATTTAGAGAATGTCAAAAAGAATTTGC
GATCTGTTCTGTTATCATCGAAACAAGGAATTGTTGCCAAACATTTGCAAAGGGAATACA
GAGAGCTAAATGGAGAATTTATTCCCCATCAAAAGTTATCTTTTTGCTCACTTGAAGAGT
TCATAAGAAGTCTTTCTGATGTTTGCAGGGTTGGATACAACAATCAAAATGAACTGACTT
ACTTTGCTCTTACGGATGGTTCTACTCAGCATATTAAGAAAATGGTAGCGAACCAAAGAC
CTGGGAAAAAAAAGTCAAAGCCATCGAGTTTCAAGCGAAACCAGTTTGCGCAGCGTCCTA
AATCGCAATATCATCACGGAAGTGGTTGGTTTAACGCACCACCTAGGTTCAGAAAGCACA
ATACGATAAAAACTACGTTCAAACAGCACACTGTACATGTTTCTCCAAATACGATGACGA
TAAACGTTAAAAACCCTCAGTATACAAGTAATAAAGTTGCTCCAGCAACACCAGCGGTTG
TAAAATCAAATCTTGCTAATTTGTTGAAAAGCAATCCTGCGGGAATACATTCGTGTCATC
TGGCAAGATTGTACAAGGAAACTTTTAAGCAGGAGTTGCCTGATAAGTTTGTTCAAGATA
TTTTGGATGGAAAGTTGCCAGAATATGCAAGAGTGGATAAAATAAGCATTGGGAATGAAA
CAAAAGCAATTCTGTTGTCCGTAAACAAAGTTCAGACCAAGAGAAATATGCAGCAAGCGA
CAAATTTGCAAATTATGGAAGAATTTGTCATAAAGGAACATTTTGTTCTTGAGATTGAAA
AAAACTATAAAGTTTCCATTCAACATGTTGAGAGCTGTGACCAAGTTTTTGTTCAGATCT
TTGAAGACGCAAATTCAATTAAACAAATGCAAACTCTGATAAAATCTCTTCATCCTTCTT
TAAAAACTTGCCAAAGCAGTCTTAAACCTGGTAGTTATGTGACCACAGATTGCTTCCTTA
GAGCTAAGGCCATTCAAGTTACGGGAGATGAAGTGGAAATTTACAACATTGATGTTGGTA
CAACATATTTCGTATCTTTGGGTTCATTAAGGTACATGAACAGCAGTATTGCCAGTTATC
CTGTCTTTGGTATTCGCTGTTCATTAAGCAGGTTAAATAAAGGTGGAAGTTGGAGTGAGG
ACGCCACTAAGTTCTGTTTGAAACTTATTTCTGTTGGGATGTCTATGATTATGAAAGTGG
TTCAAATTCCAACTACAATACTTGCAGACCAAGAATATTCCGTCATCCTTTACAGCGAAA
AACCGAGTCGTAATCTAAACGCAAGAGTTCTGGATGATGAGTTAAGTCTCATGGTAGCTC
GTACTGTGAAGTTTTCAAATCCTTTCAGGTTCCAGCCTAAAAGCTGTGCGAAGTTTCCTA
ATGATGAATATTTACATCTTTTCATCCTTAGCGTGTTATGCACAACTGAAGTTGAGGTTT
GTATTGTGGGCGAGCAATACTCGTACAAGTTGTGTCAACTGGAAAGCGCAATGCTGGCCT
TCTATAATAAACCAGAAAACAGAGGAGTATTAGCGTTACCACAACCCCCACCTTTAAATT
GCGTTTATGCTGTTCTTCAAGAGGAAACTTGCGTGAGGGGAAAATTGATCTCAATAAATG
GCAACGAAGCTGAAGTGTATCTTGTTGATAATGCTGCGTTTGAAACGGTTGCAATCTCGT
GCTTACACCCGCTCAAATACGCTTATTCACAGTTTCCGACTCAGGTTGTCACAGTTTCTC
TTGCTGGCCTTGAGCAACCTACTTTAGCCAACCACTCAACTATCCTACAATACCTCAGCG
AAAACATCGACAACAAACCATGCGTGGCGAAAATCGTGGGCAGGTTTGGAGAAGAACAAG
ACCAGATTGTTGTGGAACTGCTAGACACGAGTGGCTCTGTCGATGTTCATGTTAACAAAG
TTTGCAGAAGTCTAGTTTACTCACCTAAACATTACCCTTCACCTGACACTACTGTTCCTG
TTATTGTCCGACACATAGATCAGGATGCTGGGTTGATATTCCTCAACATATCGGGTGAAA
ACCTGACAGCTCTCCATCGGGGTATGAATGAGATCCAATCCATGATCAGTCCAAGGCGTT
CCCAGATCTCTAAACTTGCAACAGATCTGTACATTGGTAAAGAGTGTTTGGCTTGCATCT
CTGGCTCTTACTATAGAGTTGTAATTGAAGAATTCACAAACCAAAAGCCCCGAGATGTAA
AAGTATTTTTGATCGATGTTGGTAGGATGGAATACATCTCACAAGGTGCATTATTGAAAA
TGGCGTCAGAGTCGCTCCTTTCCATCCCACCACAAGCAGAATGCTGCAAAATTTCATCAC
CCCAAGAAACCAAAGAGATGCTGGCTGCAGCTGGAGACTTTCTGCACATGAACCTTACCA
CAGCAATTGACCAACTAACCACCAGTGAGTCAGTAATTGCTCGGTTTGATAAAATCGAAT
CCAGTGACGGAGGACCCCACTGCATATCATTGTGGATTGATAGCCCAATGGGGATGAAAA
CAAGAATCATCTCAGATGATGAAGAAGGTCCAAGAGTTGATGAGGTGCGAGACAGATCAA
GATCATTTTCTTCCACCTCTTCCTCACTGCTCAACTCTCCTTTGAGCACCAATTCATCAA
CCCCTGCTCTTCATGATTCATTTTCTTCAATGAATTTAGTCGGAGCTCCGAAAATTGAAA
CTCCGGACTCGGCTGCAAAGCATCAAGTATATAAAACCAAGGATATTAACCACAATACTG
AGATAATACTTTCAAGTATTTCCCCCAATACATTAGCATTAGCACCACGTGTTAACAAAC
ATGAGAGTCCACCAAAGCCACTGAGGAGAGAGGATGTTGTTTTACCATCTAACTCCCTAA
TTCCCGTCCGTGTCGAAAATGTAATTTCTCCAATCCATTTTAATCTCATTCTCCTTGATG
ATTTACAAAAGAGAGATCATCTAAGAAAAACAATGACAGCTTTCTATAGGAAAAGGCCCT
CACAAAGTAAGGTTGCTCTCAACCAAATAAACTGTGGATCTGTGTATGCTGCGGCATATG
AAGATGATGCTGGTGTTGGTTGGCACAGGGTGAAGGTACAGAGCAGCATCAATGGACAAG
TATGCGTCTACTTTCTCGACTACGGCATGTGCGATGTTATAAGTGATACAGCTTCGTTTT
ATCGCTTGGAAAAAGGCTTTGAAATCCTGCCACCTTTAAGCTTGGTTGGGCGCCTTGCGG
GGATTCAACCACTAGATGATGCTGCAGACTGGGATGACGAAACTTGCGACAGATTCACTA
ACTTAGTCATAAACCGGGATTTTTATGCCCAATTTTTTCGGATGAAATTGGACTTGGATG
ATAGGATGCCGGATTGTCGTGTCTTCAACATTTCACTCTGTGATACAAAAACTGGGGTTG
ATGTTTGGATTAATGATGTTCTTGTCGATATTTGGAACTGTGCTGAATATGTTGCCTGAA
CTGTGAGACATTTATTTGTAAACTGTCTTTTTTTCACTTTGTTGCATTTTCTGTTTTCAC
TTTTGGTGCCGCAACAAAGTGTATGTAAATACCATGTTGAAAACTGTGAAAAGTTTTGTA
AACATTGCAGTGAATTTACCGACATGACTTCCTTTCATATGATTGCAGATTGCAGTGTTT
TGTAAACCATATTTCGATTAGTTTGTTGACATTTTTTCTTTTCATTTGTGTTGCAATTAT
GTTTGAACTTCACTGTGTTGCCATTACTGCTGTAGGTGTAACATTATAAAGATAATTCAC
AGTGAACATGCCTCTATTGGAATGTGCCTAATACTTGATGCTGTATTATTATTTTTTGCC
TTGCAATTTACACTGCCTTTCACACACGCACGTGTTCACATTTAACCACTGCCTTTTGTA
ATGTATCTTTGCCTCACCATCGTACCCAATATACACCAGTAAACTGTGATTCCGTAAAAT
CGAGATTCATTCCTTCGTTTGCCAGTTTAATTTACACATTTTTCTGAATTTCTTTTCACA
AATTTTCGTTCTTTTTTTCAG
| ProSiteProfiles |
OST-HTH/LOTUS_dom (IPR025605) - T[5-78] 14.372 |
| Pfam |
OST-HTH/LOTUS_dom (IPR025605) - T[5-68] 6.1E-8 |
| Pfam |
Tudor (IPR002999) - T[273-383] 2.5E-9 - T[492-596] 5.7E-11 - T[669-792] 7.8E-9 - T[970-1094] 3.6E-13 |
| Gene3D |
SNase_OB-fold_sf (IPR035437) - T[278-305] 9.9E-14 - T[370-441] 9.9E-14 - T[498-509] 8.4E-13 - T[582-653] 8.4E-13 - T[976-1003] 8.3E-22 - T[1080-1158] 8.3E-22 |
| SMART |
Tudor (IPR002999) - T[721-779] 0.84 - T[1021-1081] 3.2 |
| ProSiteProfiles |
Tudor (IPR002999) - T[722-781] 10.2 |
| Protein Name | Identity | Bit Score | e-value |
|---|