Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C9.848.v1.A.SL1-1

Possible name(s)

SQSTM1

Gene model

KH2012:KH.C9.848

Location

KhC9 [4,663,785 / 4,670,816]

Sequences

Amino acid sequence

Length: 332

>KH.C9.848.v1.A.SL1-1
PHTAMAVQCKAYLYNSKPEKPTEIRRFTLDSEVATNYEYLYKKVSSLFPALKEVTFSLQW
KDGDGDMVWFSTDEELTHALMVRKHDMIKIFIKINPPEKDNIPPSSSSGPDPRIPPPSYD
FYHGRAQHASHGTKPPQFYQYAGFPPMFPPSYQASWGQQHFNNQQQQQQQQQHQYQQEAS
GEQYLHHVGSGVAEILRPLGIDVDVSVEHNGRRQQCSTTESQPNPSSGNTGAKTTFQSKR
NENPKPGDADSKAHEPTNQAGNDTNCVQAEMERLEVSNRSLVENPRLAESLTQLLAMGFN
NDGGWLANLLCACDYDISRALDKMQPARGSRG

Nucleotide sequence

Length: 1,525

>KH2012:KH.C9.848.v1.A.SL1-1
CCGTGTAGGAATCTTTTTGATAAAAGTAAACATATGACCACACACAGCTATGGCAGTACA
ATGCAAGGCATATTTGTATAACAGCAAGCCTGAAAAACCAACAGAAATCCGTCGGTTTAC
GCTGGACTCAGAAGTGGCAACAAACTATGAATACCTTTATAAAAAGGTTTCTTCATTGTT
CCCAGCTTTGAAAGAAGTGACTTTCTCCTTACAGTGGAAGGATGGAGATGGTGACATGGT
ATGGTTCAGTACAGATGAAGAACTAACGCATGCACTTATGGTTCGGAAGCATGATATGAT
AAAAATATTTATCAAGATCAACCCCCCAGAAAAGGATAATATACCGCCATCATCCTCATC
TGGTCCTGATCCGAGAATTCCACCGCCTTCGTATGACTTTTATCATGGACGTGCACAACA
TGCATCACATGGGACCAAACCACCCCAATTTTACCAGTATGCAGGTTTTCCACCAATGTT
CCCACCAAGTTACCAAGCGTCATGGGGCCAACAACATTTTAATAATCAACAACAACAACA
ACAACAACAGCAACACCAATATCAACAGGAAGCAAGTGGTGAACAATACCTCCACCACGT
AGGTAGTGGGGTGGCTGAGATTCTACGTCCCCTTGGTATTGATGTGGATGTCAGTGTTGA
ACATAATGGGCGTAGACAGCAATGTTCCACAACAGAAAGCCAACCGAATCCTTCATCCGG
CAACACTGGAGCTAAAACTACATTTCAAAGCAAGAGGAATGAAAATCCCAAACCAGGTGA
TGCAGATTCCAAAGCTCATGAACCAACCAATCAAGCTGGAAACGACACTAACTGTGTGCA
AGCTGAAATGGAAAGGTTGGAAGTTTCAAACAGATCACTAGTTGAAAACCCACGACTTGC
TGAATCATTAACCCAACTCCTTGCAATGGGTTTCAACAATGATGGTGGGTGGTTGGCTAA
CCTTCTATGTGCTTGTGATTATGATATAAGTCGTGCTCTCGATAAAATGCAACCAGCGCG
TGGCAGTAGAGGGTAAGAAGGGTTTCAGTCATTTTGAACAAATACATTACTTTTACTTGC
CCACATTTATCTAAGAATACATTATGTCATTTTTAAATTTTATTTTACCTTGTTTTCTTA
GACTGACATTTTTTAAAAATCTTTCATTAGTTAAGATAAGCTGGTGTTTCTTTAACTTTT
AAAAATTGTTCAAAATTATAATTTACAAAACAATATCGCGAAACTAAAATTGCCGGAAGA
TTTCTTTTAGACTTAAACTTGTAAATTGTAAATTTTGTAAATTTTACTTGTAAATTTTGT
GAATAAGTGCAGGTGACTTGGTGTGGTGTCGCTTTTTCATAGAAAAAGTAAAAAAAATGA
ATATGTTTGTAAATGTGCCTAAAGTCACAGAACACAACTTTTTACATTACTTTTTCATTC
CATAATAGTACAGATTAGTTTCATTCTTTATATTTTACTTTCATGTCTCTGGACATTTCT
TTTTTAAATACAACTTTATCCAAAC

InterProScan

ProSiteProfiles	PB1_dom (IPR000270) - T[6-95] 13.204
Pfam	PB1_dom (IPR000270) - T[23-92] 1.8E-8
SUPERFAMILY	UBA-like_sf (IPR009060) - T[283-327] 7.85E-13
Pfam	SQSTM_UBA (IPR033741) - T[284-325] 9.6E-13
CDD	SQSTM_UBA (IPR033741) - T[286-325] 4.52277E-18

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value