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- Transcript 'Phmamm.CG.MTP2014.S4...' >
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- Transcript 'KH2012:KH.C9.502.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.502.v1.C.SL1-1
Possible name(s)
CLVS1; TTPA; TTPAL
Gene model
Location
KhC9 [1,925,366 / 1,926,999]
Amino acid sequence
Length: 281
>KH.C9.502.v1.C.SL1-1
VGLVMGRYECKLSPELLDKAVNELHEPRDNDERLKAIDQLRESFSVEKFGPLIREDDGFI
LRFLRAKKFDQKKALVMLQNYHNTKKEFKEVFEKVNNPIVLKPLTEKGIMYMLQGASREG
AAVMIYRPGLLDADVNIYDLMAYSVMCMEKVIEEEKYQICGVASIEDLENFNLSMMFKIS
PMALAKMNNIWQDAMPLRFKAVHLLNEGKVFDILMAIFKPFMKKKLLKRMHVHGSNYDEL
QDFIDPALLPPFLNGTGPSPKEAAEEWNKIMEEEWPQDTAL
Nucleotide sequence
Length: 1,633
>KH2012:KH.C9.502.v1.C.SL1-1
GGTACCAAGATACTAAGATAGGTATTTTAGATAAGTTTGCTGTTGAGTTGGTTTAGTTAT
GGGGCGGTACGAATGTAAACTCTCCCCTGAGCTCTTGGATAAAGCTGTGAATGAATTGCA
TGAACCTCGTGATAATGATGAAAGGTTGAAAGCAATTGATCAGTTAAGAGAAAGCTTCAG
TGTGGAGAAGTTTGGACCACTCATAAGAGAAGATGATGGTTTTATTTTACGATTCTTGAG
GGCCAAAAAATTTGACCAGAAAAAAGCTCTTGTTATGCTGCAGAATTATCATAATACGAA
GAAAGAATTTAAAGAGGTGTTTGAAAAAGTTAACAATCCTATTGTACTGAAGCCACTCAC
TGAGAAAGGGATTATGTACATGCTGCAAGGTGCTTCTAGGGAAGGAGCTGCAGTGATGAT
ATATAGACCTGGTTTATTGGATGCAGATGTCAATATCTATGATCTTATGGCTTACAGTGT
GATGTGCATGGAAAAGGTCATAGAAGAAGAAAAATATCAGATTTGTGGAGTAGCAAGCAT
TGAGGATCTGGAAAACTTTAACTTAAGTATGATGTTTAAGATCAGCCCGATGGCATTGGC
TAAGATGAACAACATATGGCAGGACGCAATGCCCCTCAGGTTTAAAGCTGTTCATTTGCT
TAATGAGGGAAAGGTATTTGACATCTTGATGGCAATTTTCAAACCTTTTATGAAGAAGAA
ATTGTTGAAGAGAATGCACGTCCATGGGAGCAATTATGACGAACTCCAGGACTTTATCGA
CCCAGCTCTTCTTCCTCCATTTCTAAACGGAACCGGACCTAGTCCCAAGGAAGCAGCTGA
GGAATGGAACAAGATAATGGAAGAGGAATGGCCACAAGATACTGCATTGTAATTTTTAAT
GTAATTCTGTATATTTCATTTCTAATTCACATCATTTCACGTTTTTTTTTCGAACCTTTT
TTTTCAAACCATCATAAAAATGTGAAATTGTTTATTAAAGTAGGGTAAGATGGGTCACGT
TTTATTTCTATTTTCTTGTCCCATTTGGTAAGAAACAAACAACATTCAAAAAATTATAAA
CCCCTGTTCCAACGACTCCCATATACCGTTGTTAATTGTTGAAAATAGATTAGGATATTT
GGATATTATGTGCTAAAGGTGTCCTATCTTCCCCCACAGTACTATGTATAACCAGCAATG
CCAATTCACCATCTCAGGTTAATTATTTTATGCATAATTATGGGTATGCCGAACCCTGAC
AATCCTGACATGTGTATACTGTATAAATAGAATGTTTAAGTTAAGTTGCACTTTAATAGC
TAATAGTAATTGTTTAACTTCATTTACTGTTATAGCTTGGTGGTTTTATTATGTTGTGTA
ATTTGTGCAATTAATCTGCTACATTTATAGTTAAAGCTATGCTGACTTGATTGTTTTAAT
GTAGTTTAATTATTAAAACCTTTTAATTTTTGTTTATTTTAAAATGATACTCCATGTGTT
TAATTTTTTAGAATTCATGCACATTGTTTCATTATTATAAAATTTGATTTGAAAGTTCCA
GCGGTTTACGATGCATTTAATTTAGAATTCATGCACACTGTTTCATTATTATAAAATGAT
TTGAAAATTCCAG
| SUPERFAMILY |
CRAL/TRIO_N_dom_sf (IPR036273) - T[8-89] 9.68E-16 |
| Pfam |
CRAL/TRIO_N_dom (IPR011074) - T[47-80] 1.6E-8 |
| SMART |
CRAL/TRIO_N_dom (IPR011074) - T[56-81] 2.7E-9 |
| Gene3D |
CRAL-TRIO_dom_sf (IPR036865) - T[88-266] 6.4E-50 |
| CDD |
CRAL-TRIO_dom (IPR001251) - T[101-256] 2.63185E-30 |
| ProSiteProfiles |
CRAL-TRIO_dom (IPR001251) - T[101-261] 15.61 |
| SUPERFAMILY |
CRAL-TRIO_dom_sf (IPR036865) - T[103-272] 1.16E-41 |
| SMART |
CRAL-TRIO_dom (IPR001251) - T[104-258] 3.0E-25 |
| Pfam |
CRAL-TRIO_dom (IPR001251) - T[106-256] 2.0E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TTPAL_HUMAN | 32.83 % | 147 | 5.45E-42 |
| CLVS1_HUMAN | 31.518 % | 121 | 3.89E-32 |
| TTPA_HUMAN | 33.784 % | 127 | 5.16E-35 |