Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S4...'
  2. Transcript 'KH2012:KH.C9.278.v2....'

Transcript Model

Transcript Id

KH2012:KH.C9.278.v2.R.ND2-1

Possible name(s)

KH.C9.278

Location

KhC9 [3,928,115 / 3,935,687]

Sequences

Amino acid sequence

Length: 539

>KH.C9.278.v2.R.ND2-1
HVQLSMNHCLDHAETGVSTRTIKRYKNFSFGYAISCYSCSDTDYKGEPNRHSVCYDEPST
VTVRNCLPNQYCQVQFTLQDGLPTNVLRGCVSPSSDQDDFSSSAMPASAQCVTSPVLADT
TTETNCYYSCNTTDNCNSLKTNNLKTCTSNCSYSIGGGFCDYFTGKCQCNTGYSGVDCSA
VMAITYRSCVQCNSETDSGCETRKSVKQCPGNDESLPYCSATKTSTIDSAGNIIRNIVTR
GCTSSFTSADECFFSKPSDSSLSNYTEYTCISTCDTNGCNTGTPDGIVDATEDKALYCVQ
CTGPQGTGSCQSMTTPTRCPSSTSKYCVSTVEYYISETSDGMNTGPVQYELINEVRACSS
ESVAKGCSEPMNINTLSAKKVTCKETCTTNGCNIGWPARPRCSKCVSQSYSSSFSSPPDT
YDGYDSCIFNPPSPVQCDFPYQQYCVAFHNTKQLDSTGKSGYTETMMRGCSYQNHGNGCT
DVGTANGFGYSYYSCNRTCETYGCNRGLINASSRPIQSVIATLSPALVTFLLQRLLTSF

Nucleotide sequence

Length: 2,019

>KH2012:KH.C9.278.v2.R.ND2-1
TGCTAAGTTCTGGCATGCAGTCACATAAAATCTGATGTTGTAGAAGCAGTCAGTAAGTTT
TAAGTGTATAGTTACAATGTATATGGTTGTACTAAAGTCTGCTTTTTAAGAGCAGTTTGT
AAGTTCCTAAGTTCAGTTACAACGATGGTTGCATGCTCGCCGTGAAGCCAGTTTTTATTA
ATCACCTTATTCAAGATATTGGATATTCCGAAACCTAACATGTACAATTAAGTATGAATC
ATTGCCTAGACCACGCAGAGACGGGGGTTTCTACGAGGACGATCAAACGATACAAGAATT
TCTCCTTCGGATATGCTATCAGCTGCTATTCATGCTCAGATACTGACTACAAAGGCGAGC
CAAATCGACATAGCGTTTGTTACGATGAACCATCCACTGTAACTGTGAGGAATTGCTTAC
CAAATCAGTATTGCCAAGTTCAGTTTACCTTGCAAGACGGTTTACCAACAAATGTTCTTC
GCGGCTGCGTTTCTCCCAGTTCAGATCAGGATGATTTCAGCAGTAGCGCCATGCCGGCTT
CTGCGCAATGTGTTACCTCACCTGTTCTTGCAGACACCACAACAGAAACAAACTGTTATT
ACTCTTGTAACACTACGGACAACTGCAACAGTTTAAAAACAAATAACTTAAAGACGTGTA
CATCTAACTGTTCGTATTCTATTGGAGGCGGATTCTGCGATTATTTTACCGGGAAATGTC
AATGTAACACGGGTTACTCTGGAGTCGACTGCTCGGCTGTGATGGCTATAACGTACAGGA
GCTGTGTTCAATGTAATAGTGAAACAGATTCTGGTTGCGAGACCCGTAAGAGTGTCAAGC
AGTGTCCAGGGAATGACGAATCCCTGCCGTATTGCTCTGCCACTAAAACCAGCACCATTG
ATTCCGCTGGTAACATTATTCGGAACATAGTCACCAGAGGCTGCACATCCAGCTTCACTT
CTGCAGATGAGTGCTTCTTTTCAAAACCTAGTGATTCTTCATTATCAAATTACACAGAAT
ACACATGCATATCAACATGCGACACAAACGGATGCAACACGGGAACGCCCGATGGAATCG
TGGATGCAACAGAAGACAAGGCTTTATACTGTGTACAATGTACTGGCCCCCAAGGAACTG
GTTCGTGCCAAAGCATGACCACCCCAACACGATGCCCATCTTCTACTTCCAAGTACTGTG
TCTCCACTGTCGAATACTATATTTCCGAAACATCTGATGGAATGAACACTGGTCCCGTTC
AGTACGAACTAATAAACGAGGTCCGTGCATGCTCGTCTGAATCCGTAGCAAAAGGCTGCA
GCGAGCCGATGAACATCAATACACTTAGTGCAAAAAAGGTGACTTGCAAGGAGACCTGCA
CCACAAACGGTTGCAACATCGGTTGGCCCGCTCGCCCAAGATGCTCCAAGTGTGTCTCAC
AATCGTACAGTTCAAGCTTTTCCAGCCCACCTGATACTTACGATGGTTATGATAGCTGCA
TATTTAACCCACCATCCCCAGTCCAATGTGATTTTCCATACCAACAATACTGCGTAGCGT
TCCACAACACAAAACAACTAGATTCAACTGGAAAGTCCGGTTACACTGAAACAATGATGA
GAGGATGTAGTTATCAAAACCATGGTAATGGCTGTACTGATGTTGGCACTGCTAACGGGT
TTGGTTACTCCTATTACAGCTGTAACCGAACGTGTGAAACATACGGCTGTAATCGCGGTT
TAATAAACGCATCGTCACGACCCATTCAGAGTGTTATTGCAACATTGTCACCGGCATTAG
TGACGTTTCTGTTGCAACGACTTCTCACAAGTTTCTAAACCTACTATCTCTATAACATTG
TTCAAAAGACGATCGTTTTGTATTGATGAAGTTATCTCAGTTTGTTTTAACGAATTCCCA
ACGACGTTGTTACACAGCAGAGGGTGCCGTTAAACCTTCTAGCGTTTTTACACTAAGATT
TTTAGCAGTAGCTGTAGCGTAGAATTTTATACACAAAAA

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[143-179] 9.798
ProSitePatterns
EGF-like_CS (IPR013032) - T[167-178] . - T[167-178] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value