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TRANSCRIPT CARD

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  1. Molecular Tool 'FoxF(TVC)>Tbx1/10'
  2. Transcript 'KH2012:KH.C7.754.v1....'
  3. Transcript 'KH2012:KH.C9.278.v2....'

Transcript Model

Transcript Id

KH2012:KH.C9.278.v2.A.nonSL5-1

Possible name(s)

KH.C9.278

Location

KhC9 [3,928,115 / 3,935,683]

Sequences

Amino acid sequence

Length: 539

>KH.C9.278.v2.A.nonSL5-1
HVQLSMNHCLDHAETGVSTRTIKRYKNFSFGYAISCYSCSDTDYKGEPNRHSVCYDEPST
VTVRNCLPNQYCQVQFTLQDGLPTNVLRGCVSPSSDQDDFSSSAMPASAQCVTSPVLADT
TTETNCYYSCNTTDNCNSLKTNNLKTCTSNCSYSIGGGFCDYFTGKCQCNTGYSGVDCSA
VMAITYRSCVQCNSETDSGCETRKSVKQCPGNDESLPYCSATKTSTIDSAGNIIRNIVTR
GCTSSFTSADECFFSKPSDSSLSNYTEYTCISTCDTNGCNTGTPDGIVDATEDKALYCVQ
CTGPQGTGSCQSMTTPTRCPSSTSKYCVSTVEYYISETSDGMNTGPVQYELINEVRACSS
ESVAKGCSEPMNINTLSAKKVTCKETCTTNGCNIGWPARPRCSKCVSQSYSSSFSSPPDT
YDGYDSCIFNPPSPVQCDFPYQQYCVAFHNTKQLDSTGKSGYTETMMRGCSYQNHGNGCT
DVGTANGFGYSYYSCNRTCETYGCNRGLINASSRPIQSVIATLSPALVTFLLQRLLTSF

Nucleotide sequence

Length: 2,015

>KH2012:KH.C9.278.v2.A.nonSL5-1
AAGTTCTGGCATGCAGTCACATAAAATCTGATGTTGTAGAAGCAGTCAGTAAGTTTTAAG
TGTATAGTTACAATGTATATGGTTGTACTAAAGTCTGCTTTTTAAGAGCAGTTTGTAAGT
TCCTAAGTTCAGTTACAACGATGGTTGCATGCTCGCCGTGAAGCCAGTTTTTATTAATCA
CCTTATTCAAGATATTGGATATTCCGAAACCTAACATGTACAATTAAGTATGAATCATTG
CCTAGACCACGCAGAGACGGGGGTTTCTACGAGGACGATCAAACGATACAAGAATTTCTC
CTTCGGATATGCTATCAGCTGCTATTCATGCTCAGATACTGACTACAAAGGCGAGCCAAA
TCGACATAGCGTTTGTTACGATGAACCATCCACTGTAACTGTGAGGAATTGCTTACCAAA
TCAGTATTGCCAAGTTCAGTTTACCTTGCAAGACGGTTTACCAACAAATGTTCTTCGCGG
CTGCGTTTCTCCCAGTTCAGATCAGGATGATTTCAGCAGTAGCGCCATGCCGGCTTCTGC
GCAATGTGTTACCTCACCTGTTCTTGCAGACACCACAACAGAAACAAACTGTTATTACTC
TTGTAACACTACGGACAACTGCAACAGTTTAAAAACAAATAACTTAAAGACGTGTACATC
TAACTGTTCGTATTCTATTGGAGGCGGATTCTGCGATTATTTTACCGGGAAATGTCAATG
TAACACGGGTTACTCTGGAGTCGACTGCTCGGCTGTGATGGCTATAACGTACAGGAGCTG
TGTTCAATGTAATAGTGAAACAGATTCTGGTTGCGAGACCCGTAAGAGTGTCAAGCAGTG
TCCAGGGAATGACGAATCCCTGCCGTATTGCTCTGCCACTAAAACCAGCACCATTGATTC
CGCTGGTAACATTATTCGGAACATAGTCACCAGAGGCTGCACATCCAGCTTCACTTCTGC
AGATGAGTGCTTCTTTTCAAAACCTAGTGATTCTTCATTATCAAATTACACAGAATACAC
ATGCATATCAACATGCGACACAAACGGATGCAACACGGGAACGCCCGATGGAATCGTGGA
TGCAACAGAAGACAAGGCTTTATACTGTGTACAATGTACTGGCCCCCAAGGAACTGGTTC
GTGCCAAAGCATGACCACCCCAACACGATGCCCATCTTCTACTTCCAAGTACTGTGTCTC
CACTGTCGAATACTATATTTCCGAAACATCTGATGGAATGAACACTGGTCCCGTTCAGTA
CGAACTAATAAACGAGGTCCGTGCATGCTCGTCTGAATCCGTAGCAAAAGGCTGCAGCGA
GCCGATGAACATCAATACACTTAGTGCAAAAAAGGTGACTTGCAAGGAGACCTGCACCAC
AAACGGTTGCAACATCGGTTGGCCCGCTCGCCCAAGATGCTCCAAGTGTGTCTCACAATC
GTACAGTTCAAGCTTTTCCAGCCCACCTGATACTTACGATGGTTATGATAGCTGCATATT
TAACCCACCATCCCCAGTCCAATGTGATTTTCCATACCAACAATACTGCGTAGCGTTCCA
CAACACAAAACAACTAGATTCAACTGGAAAGTCCGGTTACACTGAAACAATGATGAGAGG
ATGTAGTTATCAAAACCATGGTAATGGCTGTACTGATGTTGGCACTGCTAACGGGTTTGG
TTACTCCTATTACAGCTGTAACCGAACGTGTGAAACATACGGCTGTAATCGCGGTTTAAT
AAACGCATCGTCACGACCCATTCAGAGTGTTATTGCAACATTGTCACCGGCATTAGTGAC
GTTTCTGTTGCAACGACTTCTCACAAGTTTCTAAACCTACTATCTCTATAACATTGTTCA
AAAGACGATCGTTTTGTATTGATGAAGTTATCTCAGTTTGTTTTAACGAATTCCCAACGA
CGTTGTTACACAGCAGAGGGTGCCGTTAAACCTTCTAGCGTTTTTACACTAAGATTTTTA
GCAGTAGCTGTAGCGTAGAATTTTATACACAAAAA

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[143-179] 9.798
ProSitePatterns
EGF-like_CS (IPR013032) - T[167-178] . - T[167-178] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value