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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R1.9...'
  2. Transcript 'KH2012:KH.C9.64.v1.A...'
  3. Transcript 'KH2012:KH.L18.61.v4....'
  4. Transcript 'KH2012:KH.C2.348.v6....'
  5. Transcript 'KH2012:KH.C9.278.v2....'

Transcript Model

Transcript Id

KH2012:KH.C9.278.v2.A.nonSL3-1

Possible name(s)

KH.C9.278

Location

KhC9 [3,928,115 / 3,935,694]

Sequences

Amino acid sequence

Length: 539

>KH.C9.278.v2.A.nonSL3-1
HVQLSMNHCLDHAETGVSTRTIKRYKNFSFGYAISCYSCSDTDYKGEPNRHSVCYDEPST
VTVRNCLPNQYCQVQFTLQDGLPTNVLRGCVSPSSDQDDFSSSAMPASAQCVTSPVLADT
TTETNCYYSCNTTDNCNSLKTNNLKTCTSNCSYSIGGGFCDYFTGKCQCNTGYSGVDCSA
VMAITYRSCVQCNSETDSGCETRKSVKQCPGNDESLPYCSATKTSTIDSAGNIIRNIVTR
GCTSSFTSADECFFSKPSDSSLSNYTEYTCISTCDTNGCNTGTPDGIVDATEDKALYCVQ
CTGPQGTGSCQSMTTPTRCPSSTSKYCVSTVEYYISETSDGMNTGPVQYELINEVRACSS
ESVAKGCSEPMNINTLSAKKVTCKETCTTNGCNIGWPARPRCSKCVSQSYSSSFSSPPDT
YDGYDSCIFNPPSPVQCDFPYQQYCVAFHNTKQLDSTGKSGYTETMMRGCSYQNHGNGCT
DVGTANGFGYSYYSCNRTCETYGCNRGLINASSRPIQSVIATLSPALVTFLLQRLLTSF

Nucleotide sequence

Length: 2,026

>KH2012:KH.C9.278.v2.A.nonSL3-1
CAGCAGTTGCTAAGTTCTGGCATGCAGTCACATAAAATCTGATGTTGTAGAAGCAGTCAG
TAAGTTTTAAGTGTATAGTTACAATGTATATGGTTGTACTAAAGTCTGCTTTTTAAGAGC
AGTTTGTAAGTTCCTAAGTTCAGTTACAACGATGGTTGCATGCTCGCCGTGAAGCCAGTT
TTTATTAATCACCTTATTCAAGATATTGGATATTCCGAAACCTAACATGTACAATTAAGT
ATGAATCATTGCCTAGACCACGCAGAGACGGGGGTTTCTACGAGGACGATCAAACGATAC
AAGAATTTCTCCTTCGGATATGCTATCAGCTGCTATTCATGCTCAGATACTGACTACAAA
GGCGAGCCAAATCGACATAGCGTTTGTTACGATGAACCATCCACTGTAACTGTGAGGAAT
TGCTTACCAAATCAGTATTGCCAAGTTCAGTTTACCTTGCAAGACGGTTTACCAACAAAT
GTTCTTCGCGGCTGCGTTTCTCCCAGTTCAGATCAGGATGATTTCAGCAGTAGCGCCATG
CCGGCTTCTGCGCAATGTGTTACCTCACCTGTTCTTGCAGACACCACAACAGAAACAAAC
TGTTATTACTCTTGTAACACTACGGACAACTGCAACAGTTTAAAAACAAATAACTTAAAG
ACGTGTACATCTAACTGTTCGTATTCTATTGGAGGCGGATTCTGCGATTATTTTACCGGG
AAATGTCAATGTAACACGGGTTACTCTGGAGTCGACTGCTCGGCTGTGATGGCTATAACG
TACAGGAGCTGTGTTCAATGTAATAGTGAAACAGATTCTGGTTGCGAGACCCGTAAGAGT
GTCAAGCAGTGTCCAGGGAATGACGAATCCCTGCCGTATTGCTCTGCCACTAAAACCAGC
ACCATTGATTCCGCTGGTAACATTATTCGGAACATAGTCACCAGAGGCTGCACATCCAGC
TTCACTTCTGCAGATGAGTGCTTCTTTTCAAAACCTAGTGATTCTTCATTATCAAATTAC
ACAGAATACACATGCATATCAACATGCGACACAAACGGATGCAACACGGGAACGCCCGAT
GGAATCGTGGATGCAACAGAAGACAAGGCTTTATACTGTGTACAATGTACTGGCCCCCAA
GGAACTGGTTCGTGCCAAAGCATGACCACCCCAACACGATGCCCATCTTCTACTTCCAAG
TACTGTGTCTCCACTGTCGAATACTATATTTCCGAAACATCTGATGGAATGAACACTGGT
CCCGTTCAGTACGAACTAATAAACGAGGTCCGTGCATGCTCGTCTGAATCCGTAGCAAAA
GGCTGCAGCGAGCCGATGAACATCAATACACTTAGTGCAAAAAAGGTGACTTGCAAGGAG
ACCTGCACCACAAACGGTTGCAACATCGGTTGGCCCGCTCGCCCAAGATGCTCCAAGTGT
GTCTCACAATCGTACAGTTCAAGCTTTTCCAGCCCACCTGATACTTACGATGGTTATGAT
AGCTGCATATTTAACCCACCATCCCCAGTCCAATGTGATTTTCCATACCAACAATACTGC
GTAGCGTTCCACAACACAAAACAACTAGATTCAACTGGAAAGTCCGGTTACACTGAAACA
ATGATGAGAGGATGTAGTTATCAAAACCATGGTAATGGCTGTACTGATGTTGGCACTGCT
AACGGGTTTGGTTACTCCTATTACAGCTGTAACCGAACGTGTGAAACATACGGCTGTAAT
CGCGGTTTAATAAACGCATCGTCACGACCCATTCAGAGTGTTATTGCAACATTGTCACCG
GCATTAGTGACGTTTCTGTTGCAACGACTTCTCACAAGTTTCTAAACCTACTATCTCTAT
AACATTGTTCAAAAGACGATCGTTTTGTATTGATGAAGTTATCTCAGTTTGTTTTAACGA
ATTCCCAACGACGTTGTTACACAGCAGAGGGTGCCGTTAAACCTTCTAGCGTTTTTACAC
TAAGATTTTTAGCAGTAGCTGTAGCGTAGAATTTTATACACAAAAA

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[143-179] 9.798
ProSitePatterns
EGF-like_CS (IPR013032) - T[167-178] . - T[167-178] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value