- Molecular Tool 'Cirobu.Bra>MRFaNN (Izzi 2013)' >
- Molecular Tool 'cicl19m16-MO (Hamada's MO)' >
- Transcript 'KH2012:KH.C8.912.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.912.v1.A.SL1-1
Possible name(s)
ATG4A; ATG4C; ATG4D
Gene model
Location
KhC8 [2,749,435 / 2,754,334]
Amino acid sequence
Length: 524
>KH.C8.912.v1.A.SL1-1
VLTKSSDMAFKSSFDELIKDIKSISFSNNPSNGETAQPASSKPDNGVNMKSKFLETWNNF
RYDMRSDPSFKKDSPLWLLGKCYHLKKPSLSSDTSENAEGSQQSTSESYNMLPKHLKLFL
VDFHSKLWFTYRKGFPTLNDTNLTSDTGWGCMLRTAQMMIAQSFIVHLLGRNWRWTPSRL
SMEQSDIHRNIITWFLDEQNIRCPFSLHQLTEIGLSYRCKPGNWYGPNTAAYIMQDALEC
AKGKTELLNNIMVYIAQDSTVYIDDVIEMCEWKNTASDADLKTSTTSSNRSVIVLIPVRL
GEATLNPIYIPCIQSMLTLDQSVGIMGGKPKHSLYFIGFQDEYLFYLDPHYCQQADHPAA
FKNDLLQNYHCNSPRKTNISKMDPSCCLGFYCRDYKDFQSFVCEANKFLSPPKQKMSYPL
CLIMKGSALDHRIRRKSEADSFTVIPTSSDGFTEIEFNEKTFDTEDKTDGVIAVSDDESK
ASSSTDKFSFSLASTKSLLTNIYKSKSPKPDRKFRSMEEEFELL
Nucleotide sequence
Length: 2,049
>KH2012:KH.C8.912.v1.A.SL1-1
GTTTTGTTAAACCACAAAACTGTAGACTTTGAAATTGCCAACGTCATGTGCATAAGATAA
AGAAATAAATATGGCATAAGTCTTAACAAAGTCCTCTGATATGGCATTTAAATCCAGCTT
TGATGAGCTGATCAAGGATATAAAGTCAATCTCATTTAGTAATAACCCTTCAAATGGAGA
GACTGCTCAACCAGCGAGCAGTAAACCAGATAACGGAGTAAATATGAAATCGAAATTCTT
GGAAACATGGAATAACTTCAGATATGATATGAGATCTGACCCAAGCTTTAAGAAAGACTC
TCCACTATGGTTACTTGGTAAATGTTATCATCTCAAAAAGCCAAGCCTGTCATCAGATAC
ATCAGAAAATGCAGAAGGCAGCCAACAAAGCACAAGTGAAAGTTATAATATGCTTCCTAA
ACACCTCAAGTTGTTTCTGGTTGATTTTCATTCAAAACTCTGGTTCACGTATAGAAAAGG
CTTTCCCACTTTGAATGATACAAATTTAACATCGGATACAGGATGGGGTTGTATGCTACG
TACTGCACAGATGATGATAGCTCAAAGTTTTATAGTCCATTTGTTGGGCAGAAACTGGCG
TTGGACACCCTCGAGACTAAGCATGGAGCAGTCTGACATCCATAGAAACATTATAACATG
GTTCCTTGATGAACAAAATATCAGATGTCCGTTTAGTTTGCATCAGCTTACTGAAATAGG
TTTAAGTTATCGTTGCAAGCCTGGCAACTGGTATGGCCCAAACACTGCAGCTTACATCAT
GCAAGATGCTTTAGAGTGCGCCAAGGGAAAGACAGAACTTCTAAACAACATTATGGTTTA
CATTGCTCAAGATAGTACAGTTTATATTGATGATGTCATCGAGATGTGTGAATGGAAAAA
CACAGCCAGTGATGCCGATCTAAAAACCTCAACCACCTCAAGCAATAGATCAGTTATTGT
GTTGATCCCTGTCCGTCTTGGAGAAGCAACACTGAACCCAATATACATCCCATGCATTCA
ATCCATGCTGACGTTGGATCAGAGTGTTGGAATAATGGGCGGGAAACCAAAACATTCACT
TTACTTTATCGGATTTCAAGATGAATATCTCTTCTACCTGGACCCACATTACTGCCAACA
AGCTGACCACCCAGCTGCTTTCAAGAATGATCTGCTGCAAAATTATCATTGTAATTCACC
CAGAAAGACAAATATCTCCAAGATGGACCCAAGCTGCTGTCTAGGTTTTTACTGCCGCGA
TTACAAAGACTTTCAATCATTTGTTTGTGAAGCAAATAAGTTTTTATCGCCTCCAAAACA
GAAGATGAGTTATCCACTGTGTTTAATAATGAAGGGCAGTGCATTAGATCATAGAATAAG
AAGAAAATCTGAAGCTGACTCCTTTACAGTTATTCCTACAAGCAGTGACGGTTTTACTGA
AATAGAGTTTAATGAAAAAACTTTTGACACTGAAGATAAAACGGACGGAGTGATAGCAGT
CAGTGATGATGAAAGCAAAGCCTCAAGTTCAACTGATAAGTTCAGTTTTTCTCTTGCGTC
CACCAAGTCACTATTAACGAACATTTATAAATCAAAATCCCCAAAACCAGATCGTAAATT
CCGCTCCATGGAAGAGGAGTTTGAATTATTATAGAAGTTTTCCTACATTTTAGCTTTTAA
TTTATTTTCAAAGTTTTTCATAAAATAAATATTTATTTCCGTTAAATTTGTTGGGTAGGT
TGAATTTAACCTGCACTGTGAAGCAAAGAATTCTGACACAGTTGTTGTACAATGTAGATC
AAGTGTTGCTGTTTTTGTTGCATAAATACATCTGCCGTCTGGGGTGCAATATTAACCTGT
GTAGTGTATACTCTACACCTACAGGGAACCTATATGGTCATGCCAAGCACATTTTGCCAG
AGTTTATCAGCCCACTTTTTGAACAATGTCAATCTGATAAATGATTTTTTTAAACCGACG
TTACCACTGTTTGCTGTTAGCAACCTAAATGTTAACTTCACAGAAATATAACTTTATGTT
CTAATTTTG
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATG4A_HUMAN | 36.039 % | 206 | 3.48E-61 |
| ATG4D_HUMAN | 38.616 % | 311 | 1.48E-100 |
| ATG4C_HUMAN | 37.471 % | 286 | 2.69E-91 |