Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C8.246.v1.A.SL1-1

Possible name(s)

CHERP; SF3A1; SUGP1

Gene model

KH2012:KH.C8.246

Location

KhC8 [526,990 / 528,980]

Sequences

Amino acid sequence

Length: 247

>KH.C8.246.v1.A.SL1-1
VKMDIPKPPDEPEVKNIIDKLANFVARNGVEFENMTKSKQRNNPKFSFLFGGEHYGYYQY
QLSTEQQIMNMQRMKMNTQQVVQDQMVKQSLQNAPWQQQQGGFSQYQGGSPQMPPRSSQP
PMNVPPWQQQQRPPYMPHNNMPNQPRHPTPSNPNQPTLMTPELGKLEEEINKEEEDVEKK
VKDSENNLKQQHEVLMNKQSEKIEQAVYDAQDNDRRNTARDVNISLDAMDEILQPIIDSC
TKDSISV

Nucleotide sequence

Length: 879

>KH2012:KH.C8.246.v1.A.SL1-1
AAGTTGTAAGATTGTGTAACAAATTTTGAGTGAAAATGGACATTCCGAAACCCCCAGATG
AGCCTGAGGTGAAAAACATCATAGATAAACTCGCTAATTTTGTGGCAAGAAATGGAGTTG
AATTTGAGAACATGACCAAATCTAAACAAAGGAATAATCCAAAGTTTAGCTTTCTATTTG
GTGGGGAGCATTATGGATATTATCAATATCAACTCTCTACTGAACAACAAATCATGAACA
TGCAGCGTATGAAGATGAACACCCAGCAAGTTGTCCAGGACCAAATGGTCAAGCAATCAC
TTCAGAACGCACCATGGCAGCAACAACAAGGAGGATTCTCCCAATACCAGGGAGGTTCAC
CACAGATGCCTCCAAGATCTTCACAACCACCAATGAATGTCCCACCATGGCAGCAACAAC
AAAGGCCACCATACATGCCACACAACAACATGCCTAATCAACCCCGCCACCCTACCCCAA
GTAACCCCAACCAACCAACACTCATGACCCCGGAACTTGGGAAACTTGAGGAAGAGATTA
ATAAGGAAGAGGAAGATGTGGAGAAGAAAGTGAAAGACAGCGAGAATAATTTGAAACAAC
AACATGAGGTGTTAATGAACAAACAAAGTGAAAAGATCGAGCAAGCTGTGTACGATGCGC
AAGATAATGATCGTAGAAACACAGCAAGGGACGTTAACATCTCACTTGATGCTATGGATG
AAATACTTCAACCTATAATTGATTCATGCACCAAAGACTCAATTTCAGTATGATTTTGAA
TCACCTCTGTTTATCGTGTTGTGCTTATCTTTTAGCGCTTAACCCTTAATAGTCCAATAC
ATCATTAAATACGAGAAATAAATTAAGCATTAACAGTTT

InterProScan

Gene3D	SWAP/Surp_sf (IPR035967) - T[2-70] 3.8E-24
SUPERFAMILY	SWAP/Surp_sf (IPR035967) - T[6-66] 2.88E-19
SMART	Surp (IPR000061) - T[15-67] 3.0E-18
Pfam	Surp (IPR000061) - T[16-60] 4.6E-15
ProSiteProfiles	Surp (IPR000061) - T[17-59] 15.113

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CHERP_HUMAN	66.154 %	96.3	1.05E-22