- Transcript 'Mooccu.CG.ELv1_2.S52...' >
- Region 'REG00000396' >
- Molecular Tool 'Hox12mut-MO (Ikuta 2010)' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C8.12.v1.R...'
Transcript Model
Transcript Id
KH2012:KH.C8.12.v1.R.ND2-1
Possible name(s)
TSEN2
Gene model
Location
KhC8 [1,438,432 / 1,440,366]
Amino acid sequence
Length: 340
>KH.C8.12.v1.R.ND2-1
RLKVSKFVGTSSYDYLPKEYRIYIKYMAIFRPPQKKKGASKEFFTPLPVPIASINKAVPK
LELWSYYDGHLKEDHIKVELKGDIHCLHTQGFFGRLVKTATQNDEPTEDEKSKLSIDCKG
SDTSTNHDSCLNKISGHSSTIPTQHKQHETALAAKVEEILVLTYEEAFFLSYGLGCLFVK
DYNGENINIEQQWNIFCKRNMRFPVTYCAYHHFRSKGWVPRDGIRYGGDLVLYRKGPPYY
HASYIVIIVSVDAETLQETVFREAKNRTFSWPTMSGQLRLATSVSKEVMLCHVVVPTKYL
KSDSCDVSCLNNFQVKETIVSRWISTKEREKELLDIDCDF
Nucleotide sequence
Length: 1,141
>KH2012:KH.C8.12.v1.R.ND2-1
CGTGACGTTTGAAGGTGTCAAAATTTGTAGGTACATCATCATACGATTATTTGCCCAAGG
AATACAGAATATATATAAAGTATATGGCAATTTTTCGACCCCCACAGAAGAAGAAAGGTG
CTTCAAAGGAGTTTTTCACTCCATTACCTGTGCCAATCGCAAGTATTAACAAAGCAGTCC
CGAAACTTGAGTTATGGAGTTATTACGATGGTCATTTAAAAGAGGATCATATTAAAGTAG
AACTAAAAGGAGACATTCATTGTCTACACACACAAGGTTTCTTTGGCAGGTTAGTAAAAA
CTGCAACCCAAAATGATGAACCAACAGAAGATGAAAAGTCGAAACTATCTATCGATTGCA
AAGGCTCTGACACATCTACAAATCACGATTCCTGCTTGAATAAAATCAGTGGTCACTCAT
CCACCATTCCCACACAACATAAACAGCATGAAACTGCACTAGCTGCAAAAGTAGAAGAGA
TTTTAGTTCTGACATATGAAGAAGCATTTTTTCTATCTTATGGACTTGGCTGCTTGTTTG
TCAAGGACTATAATGGAGAGAACATAAATATAGAACAGCAGTGGAATATTTTCTGTAAAC
GCAACATGCGGTTTCCAGTCACATACTGTGCATATCATCACTTCAGAAGCAAAGGTTGGG
TTCCAAGGGATGGCATACGCTATGGTGGTGACTTGGTGTTGTATAGGAAAGGCCCACCTT
ATTACCACGCAAGCTACATTGTGATAATTGTGTCAGTGGATGCAGAAACTTTACAGGAAA
CTGTTTTTAGAGAGGCCAAGAACAGAACATTTTCATGGCCCACAATGTCAGGGCAACTGA
GGCTAGCTACCTCTGTTTCAAAAGAGGTTATGCTCTGTCATGTGGTGGTGCCAACAAAGT
ACCTGAAATCAGATTCGTGTGATGTATCATGTTTGAATAACTTTCAAGTTAAAGAAACCA
TTGTTTCAAGATGGATTTCCACAAAGGAAAGGGAAAAGGAACTTTTGGATATAGACTGTG
ACTTTTAATTTAATATATGATGTACTACTGTACTTGTTTACCATTTAAAAAAGTTCATAA
TATGGTTCAAAGTTTTTGTCCCAATCATGCAAATTAACCTTTTATTTTTTTCTGCTCCAA
G
| PIRSF |
tRNA_splic_SEN2 (IPR016589) - T[26-67] 130.0 - T[51-150] 0.62 - T[96-330] 4.3E-58 |
| PANTHER |
tRNA_splic (IPR006676) - T[30-113] 6.0E-69 - T[108-332] 6.0E-69 |
| Pfam |
tRNA_intron_Endonuc_N (IPR006678) - T[68-191] 1.3E-6 |
| Gene3D |
tRNA_endonuc-like_dom_sf (IPR011856) - T[200-305] 2.3E-26 |
| SUPERFAMILY |
tRNA_intron_Endo_cat-like_sf (IPR036167) - T[202-298] 3.66E-24 |
| Pfam |
tRNA_intron_Endonuc_cat-like (IPR006677) - T[205-293] 2.3E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SEN2_HUMAN | 44.571 % | 158 | 1.3E-44 |