- Region 'REG00000115' >
- Transcript 'KH2012:KH.C8.12.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C8.12.v1.A.SL3-1
Possible name(s)
TSEN2
Gene model
Location
KhC8 [1,438,432 / 1,440,336]
Amino acid sequence
Length: 331
>KH.C8.12.v1.A.SL3-1
TSSYDYLPKEYRIYIKYMAIFRPPQKKKGASKEFFTPLPVPIASINKAVPKLELWSYYDG
HLKEDHIKVELKGDIHCLHTQGFFGRLVKTATQNDEPTEDEKSKLSIDCKGSDTSTNHDS
CLNKISGHSSTIPTQHKQHETALAAKVEEILVLTYEEAFFLSYGLGCLFVKDYNGENINI
EQQWNIFCKRNMRFPVTYCAYHHFRSKGWVPRDGIRYGGDLVLYRKGPPYYHASYIVIIV
SVDAETLQETVFREAKNRTFSWPTMSGQLRLATSVSKEVMLCHVVVPTKYLKSDSCDVSC
LNNFQVKETIVSRWISTKEREKELLDIDCDF
Nucleotide sequence
Length: 1,111
>KH2012:KH.C8.12.v1.A.SL3-1
GTACATCATCATACGATTATTTGCCCAAGGAATACAGAATATATATAAAGTATATGGCAA
TTTTTCGACCCCCACAGAAGAAGAAAGGTGCTTCAAAGGAGTTTTTCACTCCATTACCTG
TGCCAATCGCAAGTATTAACAAAGCAGTCCCGAAACTTGAGTTATGGAGTTATTACGATG
GTCATTTAAAAGAGGATCATATTAAAGTAGAACTAAAAGGAGACATTCATTGTCTACACA
CACAAGGTTTCTTTGGCAGGTTAGTAAAAACTGCAACCCAAAATGATGAACCAACAGAAG
ATGAAAAGTCGAAACTATCTATCGATTGCAAAGGCTCTGACACATCTACAAATCACGATT
CCTGCTTGAATAAAATCAGTGGTCACTCATCCACCATTCCCACACAACATAAACAGCATG
AAACTGCACTAGCTGCAAAAGTAGAAGAGATTTTAGTTCTGACATATGAAGAAGCATTTT
TTCTATCTTATGGACTTGGCTGCTTGTTTGTCAAGGACTATAATGGAGAGAACATAAATA
TAGAACAGCAGTGGAATATTTTCTGTAAACGCAACATGCGGTTTCCAGTCACATACTGTG
CATATCATCACTTCAGAAGCAAAGGTTGGGTTCCAAGGGATGGCATACGCTATGGTGGTG
ACTTGGTGTTGTATAGGAAAGGCCCACCTTATTACCACGCAAGCTACATTGTGATAATTG
TGTCAGTGGATGCAGAAACTTTACAGGAAACTGTTTTTAGAGAGGCCAAGAACAGAACAT
TTTCATGGCCCACAATGTCAGGGCAACTGAGGCTAGCTACCTCTGTTTCAAAAGAGGTTA
TGCTCTGTCATGTGGTGGTGCCAACAAAGTACCTGAAATCAGATTCGTGTGATGTATCAT
GTTTGAATAACTTTCAAGTTAAAGAAACCATTGTTTCAAGATGGATTTCCACAAAGGAAA
GGGAAAAGGAACTTTTGGATATAGACTGTGACTTTTAATTTAATATATGATGTACTACTG
TACTTGTTTACCATTTAAAAAAGTTCATAATATGGTTCAAAGTTTTTGTCCCAATCATGC
AAATTAACCTTTTATTTTTTTCTGCTCCAAG
| PIRSF |
tRNA_splic_SEN2 (IPR016589) - T[17-56] 130.0 - T[49-119] 1.9 - T[86-321] 3.8E-58 |
| PANTHER |
tRNA_splic (IPR006676) - T[21-104] 5.3E-69 - T[99-323] 5.3E-69 |
| Pfam |
tRNA_intron_Endonuc_N (IPR006678) - T[59-182] 1.3E-6 |
| Gene3D |
tRNA_endonuc-like_dom_sf (IPR011856) - T[191-296] 2.1E-26 |
| SUPERFAMILY |
tRNA_intron_Endo_cat-like_sf (IPR036167) - T[193-289] 3.49E-24 |
| Pfam |
tRNA_intron_Endonuc_cat-like (IPR006677) - T[196-284] 2.2E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SEN2_HUMAN | 44.571 % | 159 | 8.47E-45 |