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TRANSCRIPT CARD

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  1. Region 'REG00001149' > 
  2. Clone 'ma309e03' > 
  3. Transcript 'Haaura.CG.MTP2014.S4...' > 
  4. Clone 'ma129f16' > 
  5. Transcript 'KH2012:KH.C8.12.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C8.12.v1.A.nonSL8-1

Possible name(s)

TSEN2

Gene model

KH2012:KH.C8.12

Location

KhC8 [1,438,432 / 1,440,298]

Sequences

Amino acid sequence

Length: 319

>KH.C8.12.v1.A.nonSL8-1
IYIKYMAIFRPPQKKKGASKEFFTPLPVPIASINKAVPKLELWSYYDGHLKEDHIKVELK
GDIHCLHTQGFFGRLVKTATQNDEPTEDEKSKLSIDCKGSDTSTNHDSCLNKISGHSSTI
PTQHKQHETALAAKVEEILVLTYEEAFFLSYGLGCLFVKDYNGENINIEQQWNIFCKRNM
RFPVTYCAYHHFRSKGWVPRDGIRYGGDLVLYRKGPPYYHASYIVIIVSVDAETLQETVF
REAKNRTFSWPTMSGQLRLATSVSKEVMLCHVVVPTKYLKSDSCDVSCLNNFQVKETIVS
RWISTKEREKELLDIDCDF

Nucleotide sequence

Length: 1,073

>KH2012:KH.C8.12.v1.A.nonSL8-1
ATATATATAAAGTATATGGCAATTTTTCGACCCCCACAGAAGAAGAAAGGTGCTTCAAAG
GAGTTTTTCACTCCATTACCTGTGCCAATCGCAAGTATTAACAAAGCAGTCCCGAAACTT
GAGTTATGGAGTTATTACGATGGTCATTTAAAAGAGGATCATATTAAAGTAGAACTAAAA
GGAGACATTCATTGTCTACACACACAAGGTTTCTTTGGCAGGTTAGTAAAAACTGCAACC
CAAAATGATGAACCAACAGAAGATGAAAAGTCGAAACTATCTATCGATTGCAAAGGCTCT
GACACATCTACAAATCACGATTCCTGCTTGAATAAAATCAGTGGTCACTCATCCACCATT
CCCACACAACATAAACAGCATGAAACTGCACTAGCTGCAAAAGTAGAAGAGATTTTAGTT
CTGACATATGAAGAAGCATTTTTTCTATCTTATGGACTTGGCTGCTTGTTTGTCAAGGAC
TATAATGGAGAGAACATAAATATAGAACAGCAGTGGAATATTTTCTGTAAACGCAACATG
CGGTTTCCAGTCACATACTGTGCATATCATCACTTCAGAAGCAAAGGTTGGGTTCCAAGG
GATGGCATACGCTATGGTGGTGACTTGGTGTTGTATAGGAAAGGCCCACCTTATTACCAC
GCAAGCTACATTGTGATAATTGTGTCAGTGGATGCAGAAACTTTACAGGAAACTGTTTTT
AGAGAGGCCAAGAACAGAACATTTTCATGGCCCACAATGTCAGGGCAACTGAGGCTAGCT
ACCTCTGTTTCAAAAGAGGTTATGCTCTGTCATGTGGTGGTGCCAACAAAGTACCTGAAA
TCAGATTCGTGTGATGTATCATGTTTGAATAACTTTCAAGTTAAAGAAACCATTGTTTCA
AGATGGATTTCCACAAAGGAAAGGGAAAAGGAACTTTTGGATATAGACTGTGACTTTTAA
TTTAATATATGATGTACTACTGTACTTGTTTACCATTTAAAAAAGTTCATAATATGGTTC
AAAGTTTTTGTCCCAATCATGCAAATTAACCTTTTATTTTTTTCTGCTCCAAG

InterProScan

PIRSF
tRNA_splic_SEN2 (IPR016589) - T[5-44] 130.0 - T[38-107] 1.8 - T[74-309] 3.4E-58
PANTHER
tRNA_splic (IPR006676) - T[9-92] 4.6E-69 - T[87-311] 4.6E-69
Pfam
tRNA_intron_Endonuc_N (IPR006678) - T[47-171] 1.2E-6
Gene3D
tRNA_endonuc-like_dom_sf (IPR011856) - T[179-284] 2.0E-26
SUPERFAMILY
tRNA_intron_Endo_cat-like_sf (IPR036167) - T[181-277] 3.14E-24
Pfam
tRNA_intron_Endonuc_cat-like (IPR006677) - T[184-272] 2.1E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SEN2_HUMAN 44.571 % 159 4.64E-45