- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C8.12.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C8.12.v1.A.nonSL7-1
Possible name(s)
TSEN2
Gene model
Location
KhC8 [1,438,432 / 1,440,301]
Amino acid sequence
Length: 320
>KH.C8.12.v1.A.nonSL7-1
RIYIKYMAIFRPPQKKKGASKEFFTPLPVPIASINKAVPKLELWSYYDGHLKEDHIKVEL
KGDIHCLHTQGFFGRLVKTATQNDEPTEDEKSKLSIDCKGSDTSTNHDSCLNKISGHSST
IPTQHKQHETALAAKVEEILVLTYEEAFFLSYGLGCLFVKDYNGENINIEQQWNIFCKRN
MRFPVTYCAYHHFRSKGWVPRDGIRYGGDLVLYRKGPPYYHASYIVIIVSVDAETLQETV
FREAKNRTFSWPTMSGQLRLATSVSKEVMLCHVVVPTKYLKSDSCDVSCLNNFQVKETIV
SRWISTKEREKELLDIDCDF
Nucleotide sequence
Length: 1,076
>KH2012:KH.C8.12.v1.A.nonSL7-1
AGAATATATATAAAGTATATGGCAATTTTTCGACCCCCACAGAAGAAGAAAGGTGCTTCA
AAGGAGTTTTTCACTCCATTACCTGTGCCAATCGCAAGTATTAACAAAGCAGTCCCGAAA
CTTGAGTTATGGAGTTATTACGATGGTCATTTAAAAGAGGATCATATTAAAGTAGAACTA
AAAGGAGACATTCATTGTCTACACACACAAGGTTTCTTTGGCAGGTTAGTAAAAACTGCA
ACCCAAAATGATGAACCAACAGAAGATGAAAAGTCGAAACTATCTATCGATTGCAAAGGC
TCTGACACATCTACAAATCACGATTCCTGCTTGAATAAAATCAGTGGTCACTCATCCACC
ATTCCCACACAACATAAACAGCATGAAACTGCACTAGCTGCAAAAGTAGAAGAGATTTTA
GTTCTGACATATGAAGAAGCATTTTTTCTATCTTATGGACTTGGCTGCTTGTTTGTCAAG
GACTATAATGGAGAGAACATAAATATAGAACAGCAGTGGAATATTTTCTGTAAACGCAAC
ATGCGGTTTCCAGTCACATACTGTGCATATCATCACTTCAGAAGCAAAGGTTGGGTTCCA
AGGGATGGCATACGCTATGGTGGTGACTTGGTGTTGTATAGGAAAGGCCCACCTTATTAC
CACGCAAGCTACATTGTGATAATTGTGTCAGTGGATGCAGAAACTTTACAGGAAACTGTT
TTTAGAGAGGCCAAGAACAGAACATTTTCATGGCCCACAATGTCAGGGCAACTGAGGCTA
GCTACCTCTGTTTCAAAAGAGGTTATGCTCTGTCATGTGGTGGTGCCAACAAAGTACCTG
AAATCAGATTCGTGTGATGTATCATGTTTGAATAACTTTCAAGTTAAAGAAACCATTGTT
TCAAGATGGATTTCCACAAAGGAAAGGGAAAAGGAACTTTTGGATATAGACTGTGACTTT
TAATTTAATATATGATGTACTACTGTACTTGTTTACCATTTAAAAAAGTTCATAATATGG
TTCAAAGTTTTTGTCCCAATCATGCAAATTAACCTTTTATTTTTTTCTGCTCCAAG
| PIRSF |
tRNA_splic_SEN2 (IPR016589) - T[6-45] 130.0 - T[39-108] 1.8 - T[75-310] 3.4E-58 |
| PANTHER |
tRNA_splic (IPR006676) - T[10-93] 4.6E-69 - T[88-312] 4.6E-69 |
| Pfam |
tRNA_intron_Endonuc_N (IPR006678) - T[48-172] 1.2E-6 |
| Gene3D |
tRNA_endonuc-like_dom_sf (IPR011856) - T[180-285] 2.0E-26 |
| SUPERFAMILY |
tRNA_intron_Endo_cat-like_sf (IPR036167) - T[182-278] 3.14E-24 |
| Pfam |
tRNA_intron_Endonuc_cat-like (IPR006677) - T[185-273] 2.1E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SEN2_HUMAN | 44.571 % | 159 | 4.78E-45 |