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TRANSCRIPT CARD

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  1. EST 'BW100655'
  2. Transcript 'KH2012:KH.C1.928.v1....'
  3. Transcript 'KH2012:KH.C4.182.v2....'
  4. Transcript 'Harore.CG.MTP2014.S2...'
  5. Transcript 'KH2012:KH.C8.12.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C8.12.v1.A.nonSL7-1

Possible name(s)

TSEN2

Location

KhC8 [1,438,432 / 1,440,301]

Sequences

Amino acid sequence

Length: 320

>KH.C8.12.v1.A.nonSL7-1
RIYIKYMAIFRPPQKKKGASKEFFTPLPVPIASINKAVPKLELWSYYDGHLKEDHIKVEL
KGDIHCLHTQGFFGRLVKTATQNDEPTEDEKSKLSIDCKGSDTSTNHDSCLNKISGHSST
IPTQHKQHETALAAKVEEILVLTYEEAFFLSYGLGCLFVKDYNGENINIEQQWNIFCKRN
MRFPVTYCAYHHFRSKGWVPRDGIRYGGDLVLYRKGPPYYHASYIVIIVSVDAETLQETV
FREAKNRTFSWPTMSGQLRLATSVSKEVMLCHVVVPTKYLKSDSCDVSCLNNFQVKETIV
SRWISTKEREKELLDIDCDF

Nucleotide sequence

Length: 1,076

>KH2012:KH.C8.12.v1.A.nonSL7-1
AGAATATATATAAAGTATATGGCAATTTTTCGACCCCCACAGAAGAAGAAAGGTGCTTCA
AAGGAGTTTTTCACTCCATTACCTGTGCCAATCGCAAGTATTAACAAAGCAGTCCCGAAA
CTTGAGTTATGGAGTTATTACGATGGTCATTTAAAAGAGGATCATATTAAAGTAGAACTA
AAAGGAGACATTCATTGTCTACACACACAAGGTTTCTTTGGCAGGTTAGTAAAAACTGCA
ACCCAAAATGATGAACCAACAGAAGATGAAAAGTCGAAACTATCTATCGATTGCAAAGGC
TCTGACACATCTACAAATCACGATTCCTGCTTGAATAAAATCAGTGGTCACTCATCCACC
ATTCCCACACAACATAAACAGCATGAAACTGCACTAGCTGCAAAAGTAGAAGAGATTTTA
GTTCTGACATATGAAGAAGCATTTTTTCTATCTTATGGACTTGGCTGCTTGTTTGTCAAG
GACTATAATGGAGAGAACATAAATATAGAACAGCAGTGGAATATTTTCTGTAAACGCAAC
ATGCGGTTTCCAGTCACATACTGTGCATATCATCACTTCAGAAGCAAAGGTTGGGTTCCA
AGGGATGGCATACGCTATGGTGGTGACTTGGTGTTGTATAGGAAAGGCCCACCTTATTAC
CACGCAAGCTACATTGTGATAATTGTGTCAGTGGATGCAGAAACTTTACAGGAAACTGTT
TTTAGAGAGGCCAAGAACAGAACATTTTCATGGCCCACAATGTCAGGGCAACTGAGGCTA
GCTACCTCTGTTTCAAAAGAGGTTATGCTCTGTCATGTGGTGGTGCCAACAAAGTACCTG
AAATCAGATTCGTGTGATGTATCATGTTTGAATAACTTTCAAGTTAAAGAAACCATTGTT
TCAAGATGGATTTCCACAAAGGAAAGGGAAAAGGAACTTTTGGATATAGACTGTGACTTT
TAATTTAATATATGATGTACTACTGTACTTGTTTACCATTTAAAAAAGTTCATAATATGG
TTCAAAGTTTTTGTCCCAATCATGCAAATTAACCTTTTATTTTTTTCTGCTCCAAG

InterProScan

PIRSF
tRNA_splic_SEN2 (IPR016589) - T[6-45] 130.0 - T[39-108] 1.8 - T[75-310] 3.4E-58
PANTHER
tRNA_splic (IPR006676) - T[10-93] 4.6E-69 - T[88-312] 4.6E-69
Pfam
tRNA_intron_Endonuc_N (IPR006678) - T[48-172] 1.2E-6
Gene3D
tRNA_endonuc-like_dom_sf (IPR011856) - T[180-285] 2.0E-26
SUPERFAMILY
tRNA_intron_Endo_cat-like_sf (IPR036167) - T[182-278] 3.14E-24
Pfam
tRNA_intron_Endonuc_cat-like (IPR006677) - T[185-273] 2.1E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SEN2_HUMAN 44.571 % 159 4.78E-45