- Transcript 'KH2012:KH.L4.26.v1.C...' >
- Transcript 'KH2012:KH.C8.12.v1.A...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Region 'REG00001111' >
- Transcript 'KH2012:KH.C8.12.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C8.12.v1.A.nonSL6-1
Possible name(s)
TSEN2
Gene model
Location
KhC8 [1,438,432 / 1,440,384]
Amino acid sequence
Length: 340
>KH.C8.12.v1.A.nonSL6-1
RLKVSKFVGTSSYDYLPKEYRIYIKYMAIFRPPQKKKGASKEFFTPLPVPIASINKAVPK
LELWSYYDGHLKEDHIKVELKGDIHCLHTQGFFGRLVKTATQNDEPTEDEKSKLSIDCKG
SDTSTNHDSCLNKISGHSSTIPTQHKQHETALAAKVEEILVLTYEEAFFLSYGLGCLFVK
DYNGENINIEQQWNIFCKRNMRFPVTYCAYHHFRSKGWVPRDGIRYGGDLVLYRKGPPYY
HASYIVIIVSVDAETLQETVFREAKNRTFSWPTMSGQLRLATSVSKEVMLCHVVVPTKYL
KSDSCDVSCLNNFQVKETIVSRWISTKEREKELLDIDCDF
Nucleotide sequence
Length: 1,159
>KH2012:KH.C8.12.v1.A.nonSL6-1
AATACTCGTAACTTAACACGTGACGTTTGAAGGTGTCAAAATTTGTAGGTACATCATCAT
ACGATTATTTGCCCAAGGAATACAGAATATATATAAAGTATATGGCAATTTTTCGACCCC
CACAGAAGAAGAAAGGTGCTTCAAAGGAGTTTTTCACTCCATTACCTGTGCCAATCGCAA
GTATTAACAAAGCAGTCCCGAAACTTGAGTTATGGAGTTATTACGATGGTCATTTAAAAG
AGGATCATATTAAAGTAGAACTAAAAGGAGACATTCATTGTCTACACACACAAGGTTTCT
TTGGCAGGTTAGTAAAAACTGCAACCCAAAATGATGAACCAACAGAAGATGAAAAGTCGA
AACTATCTATCGATTGCAAAGGCTCTGACACATCTACAAATCACGATTCCTGCTTGAATA
AAATCAGTGGTCACTCATCCACCATTCCCACACAACATAAACAGCATGAAACTGCACTAG
CTGCAAAAGTAGAAGAGATTTTAGTTCTGACATATGAAGAAGCATTTTTTCTATCTTATG
GACTTGGCTGCTTGTTTGTCAAGGACTATAATGGAGAGAACATAAATATAGAACAGCAGT
GGAATATTTTCTGTAAACGCAACATGCGGTTTCCAGTCACATACTGTGCATATCATCACT
TCAGAAGCAAAGGTTGGGTTCCAAGGGATGGCATACGCTATGGTGGTGACTTGGTGTTGT
ATAGGAAAGGCCCACCTTATTACCACGCAAGCTACATTGTGATAATTGTGTCAGTGGATG
CAGAAACTTTACAGGAAACTGTTTTTAGAGAGGCCAAGAACAGAACATTTTCATGGCCCA
CAATGTCAGGGCAACTGAGGCTAGCTACCTCTGTTTCAAAAGAGGTTATGCTCTGTCATG
TGGTGGTGCCAACAAAGTACCTGAAATCAGATTCGTGTGATGTATCATGTTTGAATAACT
TTCAAGTTAAAGAAACCATTGTTTCAAGATGGATTTCCACAAAGGAAAGGGAAAAGGAAC
TTTTGGATATAGACTGTGACTTTTAATTTAATATATGATGTACTACTGTACTTGTTTACC
ATTTAAAAAAGTTCATAATATGGTTCAAAGTTTTTGTCCCAATCATGCAAATTAACCTTT
TATTTTTTTCTGCTCCAAG
| PIRSF |
tRNA_splic_SEN2 (IPR016589) - T[26-67] 130.0 - T[51-150] 0.62 - T[96-330] 4.3E-58 |
| PANTHER |
tRNA_splic (IPR006676) - T[30-113] 6.0E-69 - T[108-332] 6.0E-69 |
| Pfam |
tRNA_intron_Endonuc_N (IPR006678) - T[68-191] 1.3E-6 |
| Gene3D |
tRNA_endonuc-like_dom_sf (IPR011856) - T[200-305] 2.3E-26 |
| SUPERFAMILY |
tRNA_intron_Endo_cat-like_sf (IPR036167) - T[202-298] 3.66E-24 |
| Pfam |
tRNA_intron_Endonuc_cat-like (IPR006677) - T[205-293] 2.3E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SEN2_HUMAN | 44.571 % | 158 | 1.3E-44 |