- Transcript 'KH2012:KH.C8.663.v1....' >
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- Transcript 'KH2012:KH.C8.12.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C8.12.v1.A.nonSL5-1
Possible name(s)
TSEN2
Gene model
Location
KhC8 [1,438,432 / 1,440,300]
Amino acid sequence
Length: 319
>KH.C8.12.v1.A.nonSL5-1
IYIKYMAIFRPPQKKKGASKEFFTPLPVPIASINKAVPKLELWSYYDGHLKEDHIKVELK
GDIHCLHTQGFFGRLVKTATQNDEPTEDEKSKLSIDCKGSDTSTNHDSCLNKISGHSSTI
PTQHKQHETALAAKVEEILVLTYEEAFFLSYGLGCLFVKDYNGENINIEQQWNIFCKRNM
RFPVTYCAYHHFRSKGWVPRDGIRYGGDLVLYRKGPPYYHASYIVIIVSVDAETLQETVF
REAKNRTFSWPTMSGQLRLATSVSKEVMLCHVVVPTKYLKSDSCDVSCLNNFQVKETIVS
RWISTKEREKELLDIDCDF
Nucleotide sequence
Length: 1,075
>KH2012:KH.C8.12.v1.A.nonSL5-1
GAATATATATAAAGTATATGGCAATTTTTCGACCCCCACAGAAGAAGAAAGGTGCTTCAA
AGGAGTTTTTCACTCCATTACCTGTGCCAATCGCAAGTATTAACAAAGCAGTCCCGAAAC
TTGAGTTATGGAGTTATTACGATGGTCATTTAAAAGAGGATCATATTAAAGTAGAACTAA
AAGGAGACATTCATTGTCTACACACACAAGGTTTCTTTGGCAGGTTAGTAAAAACTGCAA
CCCAAAATGATGAACCAACAGAAGATGAAAAGTCGAAACTATCTATCGATTGCAAAGGCT
CTGACACATCTACAAATCACGATTCCTGCTTGAATAAAATCAGTGGTCACTCATCCACCA
TTCCCACACAACATAAACAGCATGAAACTGCACTAGCTGCAAAAGTAGAAGAGATTTTAG
TTCTGACATATGAAGAAGCATTTTTTCTATCTTATGGACTTGGCTGCTTGTTTGTCAAGG
ACTATAATGGAGAGAACATAAATATAGAACAGCAGTGGAATATTTTCTGTAAACGCAACA
TGCGGTTTCCAGTCACATACTGTGCATATCATCACTTCAGAAGCAAAGGTTGGGTTCCAA
GGGATGGCATACGCTATGGTGGTGACTTGGTGTTGTATAGGAAAGGCCCACCTTATTACC
ACGCAAGCTACATTGTGATAATTGTGTCAGTGGATGCAGAAACTTTACAGGAAACTGTTT
TTAGAGAGGCCAAGAACAGAACATTTTCATGGCCCACAATGTCAGGGCAACTGAGGCTAG
CTACCTCTGTTTCAAAAGAGGTTATGCTCTGTCATGTGGTGGTGCCAACAAAGTACCTGA
AATCAGATTCGTGTGATGTATCATGTTTGAATAACTTTCAAGTTAAAGAAACCATTGTTT
CAAGATGGATTTCCACAAAGGAAAGGGAAAAGGAACTTTTGGATATAGACTGTGACTTTT
AATTTAATATATGATGTACTACTGTACTTGTTTACCATTTAAAAAAGTTCATAATATGGT
TCAAAGTTTTTGTCCCAATCATGCAAATTAACCTTTTATTTTTTTCTGCTCCAAG
| PIRSF |
tRNA_splic_SEN2 (IPR016589) - T[5-44] 130.0 - T[38-107] 1.8 - T[74-309] 3.4E-58 |
| PANTHER |
tRNA_splic (IPR006676) - T[9-92] 4.6E-69 - T[87-311] 4.6E-69 |
| Pfam |
tRNA_intron_Endonuc_N (IPR006678) - T[47-171] 1.2E-6 |
| Gene3D |
tRNA_endonuc-like_dom_sf (IPR011856) - T[179-284] 2.0E-26 |
| SUPERFAMILY |
tRNA_intron_Endo_cat-like_sf (IPR036167) - T[181-277] 3.14E-24 |
| Pfam |
tRNA_intron_Endonuc_cat-like (IPR006677) - T[184-272] 2.1E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SEN2_HUMAN | 44.571 % | 159 | 4.64E-45 |