- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C10.59.v1....' >
- EST 'AHC0AAA232YO03_RM1' >
- Molecular Tool 'FGF8/17/18-MO (Imai 2009)' >
- Transcript 'KH2012:KH.C8.12.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C8.12.v1.A.nonSL1-1
Possible name(s)
TSEN2
Gene model
Location
KhC8 [1,438,432 / 1,440,349]
Amino acid sequence
Length: 336
>KH.C8.12.v1.A.nonSL1-1
SKFVGTSSYDYLPKEYRIYIKYMAIFRPPQKKKGASKEFFTPLPVPIASINKAVPKLELW
SYYDGHLKEDHIKVELKGDIHCLHTQGFFGRLVKTATQNDEPTEDEKSKLSIDCKGSDTS
TNHDSCLNKISGHSSTIPTQHKQHETALAAKVEEILVLTYEEAFFLSYGLGCLFVKDYNG
ENINIEQQWNIFCKRNMRFPVTYCAYHHFRSKGWVPRDGIRYGGDLVLYRKGPPYYHASY
IVIIVSVDAETLQETVFREAKNRTFSWPTMSGQLRLATSVSKEVMLCHVVVPTKYLKSDS
CDVSCLNNFQVKETIVSRWISTKEREKELLDIDCDF
Nucleotide sequence
Length: 1,124
>KH2012:KH.C8.12.v1.A.nonSL1-1
TCAAAATTTGTAGGTACATCATCATACGATTATTTGCCCAAGGAATACAGAATATATATA
AAGTATATGGCAATTTTTCGACCCCCACAGAAGAAGAAAGGTGCTTCAAAGGAGTTTTTC
ACTCCATTACCTGTGCCAATCGCAAGTATTAACAAAGCAGTCCCGAAACTTGAGTTATGG
AGTTATTACGATGGTCATTTAAAAGAGGATCATATTAAAGTAGAACTAAAAGGAGACATT
CATTGTCTACACACACAAGGTTTCTTTGGCAGGTTAGTAAAAACTGCAACCCAAAATGAT
GAACCAACAGAAGATGAAAAGTCGAAACTATCTATCGATTGCAAAGGCTCTGACACATCT
ACAAATCACGATTCCTGCTTGAATAAAATCAGTGGTCACTCATCCACCATTCCCACACAA
CATAAACAGCATGAAACTGCACTAGCTGCAAAAGTAGAAGAGATTTTAGTTCTGACATAT
GAAGAAGCATTTTTTCTATCTTATGGACTTGGCTGCTTGTTTGTCAAGGACTATAATGGA
GAGAACATAAATATAGAACAGCAGTGGAATATTTTCTGTAAACGCAACATGCGGTTTCCA
GTCACATACTGTGCATATCATCACTTCAGAAGCAAAGGTTGGGTTCCAAGGGATGGCATA
CGCTATGGTGGTGACTTGGTGTTGTATAGGAAAGGCCCACCTTATTACCACGCAAGCTAC
ATTGTGATAATTGTGTCAGTGGATGCAGAAACTTTACAGGAAACTGTTTTTAGAGAGGCC
AAGAACAGAACATTTTCATGGCCCACAATGTCAGGGCAACTGAGGCTAGCTACCTCTGTT
TCAAAAGAGGTTATGCTCTGTCATGTGGTGGTGCCAACAAAGTACCTGAAATCAGATTCG
TGTGATGTATCATGTTTGAATAACTTTCAAGTTAAAGAAACCATTGTTTCAAGATGGATT
TCCACAAAGGAAAGGGAAAAGGAACTTTTGGATATAGACTGTGACTTTTAATTTAATATA
TGATGTACTACTGTACTTGTTTACCATTTAAAAAAGTTCATAATATGGTTCAAAGTTTTT
GTCCCAATCATGCAAATTAACCTTTTATTTTTTTCTGCTCCAAG
| PIRSF |
tRNA_splic_SEN2 (IPR016589) - T[22-61] 140.0 - T[47-143] 0.74 - T[91-326] 3.9E-58 |
| PANTHER |
tRNA_splic (IPR006676) - T[26-109] 5.7E-69 - T[104-328] 5.7E-69 |
| Pfam |
tRNA_intron_Endonuc_N (IPR006678) - T[64-187] 1.3E-6 |
| Gene3D |
tRNA_endonuc-like_dom_sf (IPR011856) - T[196-301] 2.2E-26 |
| SUPERFAMILY |
tRNA_intron_Endo_cat-like_sf (IPR036167) - T[198-294] 3.49E-24 |
| Pfam |
tRNA_intron_Endonuc_cat-like (IPR006677) - T[201-289] 2.3E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SEN2_HUMAN | 44.571 % | 158 | 1.07E-44 |