- Transcript 'KH2012:KH.C6.236.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.236.v1.A.SL1-1
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
KhC6 [1,733,391 / 1,741,872]
Amino acid sequence
Length: 778
>KH.C6.236.v1.A.SL1-1
IIKTADYPTNCKAIITACKVRDSLCKVSRLFSSAKMTSFLRTNLLSQSGNNFWKRTSLWT
SRYSQVSHFYSKNLSHITTNPPPFCFQHFSRDRIFGLVLNKNLPALTLQKNYRFLSTSAR
QQQQSNNENNENDFMNNLLKVFLGTTFFAFGTILLIRSLEASMEQQKISWSEFVEKYLVT
GEVKRLDITSQHTVLVQLHHGAVVDGNRENFVRIGNIKNTAEIEGMLRREERRLNIDPVD
GIHVQPLPPPRKYTFMDLMFFAMLGLMLVPLLFGRKMMSENSIQKMMKTVMGQSGTDSLA
KPTGIYFKDVAGMKEAKQEVMEFVDFLKRPDKYKTLGAKMPKGCLLTGPPGVGKTLLAKA
VASESGVPFIPKSGSDFVELIGGLGAKRVRQLFENARKMAPCIVYIDELDAIGGQRKDSN
SYQDSSEKDRTLNQILVEMDGMLSAQHDVLVLASTNRPDVLDKAITRPGRFDRHIYIDLP
TKIERKQILERHLATITLENQPKEYSEQLATVTPGMSGADLANLCNLAAIQAATEGDKVV
KEKHLDYAVERVIAGAPKSSTAVSPEERKIVAVHESGHALMGWLLEHTSALSKVSIIPRT
NAALGFSRTLPTERHLHTPEQILDNMCMALGGRAAEEIVFGNVTQGAQDDLTKVTDMAYA
HVKTFGFNPVVGPLSFTEDGDHSLRPYSERLATTMDREVNKLIKSAYERAKKVLQQNREL
LDTLTSALFERESLNFDDVVMLIGAPAYGNKEQIQTVPFGPFASDTQETELETEKEET
Nucleotide sequence
Length: 3,076
>KH2012:KH.C6.236.v1.A.SL1-1
GTAAAAAGTAAATGTAGGGAACTTGTATAAAATTGTATAAAGACAAATAGATAATCAAAA
CTGCAGATTATCCAACAAATTGCAAGGCTATTATAACAGCCTGCAAAGTAAGGGATTCAC
TTTGCAAAGTTTCAAGACTTTTTTCATCAGCAAAAATGACTTCATTTTTACGGACCAATT
TACTGTCTCAGAGTGGTAACAACTTCTGGAAAAGAACTTCATTATGGACATCAAGGTACT
CTCAGGTGTCTCACTTCTACAGCAAAAACCTGTCGCATATAACAACCAATCCACCGCCAT
TTTGCTTCCAGCATTTTTCAAGGGACAGAATTTTCGGGCTTGTATTGAACAAAAACTTGC
CAGCACTCACACTGCAAAAGAATTATCGTTTTTTGAGCACCAGTGCACGTCAGCAACAGC
AAAGTAATAATGAAAATAATGAAAACGATTTTATGAACAATTTGCTGAAAGTTTTTCTTG
GCACTACGTTCTTTGCTTTTGGAACAATACTTTTAATACGCTCTCTGGAGGCATCCATGG
AACAGCAGAAAATATCCTGGTCAGAGTTTGTGGAGAAGTATTTGGTGACAGGAGAAGTGA
AGCGACTTGACATAACATCTCAACACACAGTACTTGTTCAACTTCATCATGGGGCAGTGG
TGGATGGGAACAGGGAAAACTTTGTCAGGATTGGAAATATAAAAAACACAGCTGAGATCG
AGGGGATGTTAAGAAGAGAAGAAAGAAGGTTAAATATAGACCCCGTGGATGGAATACATG
TACAACCATTACCACCACCACGAAAATATACCTTCATGGATTTAATGTTCTTTGCCATGC
TTGGCCTTATGCTTGTACCTTTGCTATTTGGAAGGAAAATGATGTCTGAAAACTCAATTC
AAAAAATGATGAAAACGGTTATGGGTCAGAGTGGCACAGACTCACTTGCAAAACCAACGG
GGATTTATTTTAAAGACGTGGCTGGTATGAAAGAAGCAAAGCAGGAGGTTATGGAATTTG
TCGACTTTTTGAAGAGGCCCGATAAATATAAAACACTTGGGGCAAAAATGCCGAAAGGTT
GTCTGCTCACTGGGCCACCCGGTGTTGGGAAAACCCTCCTAGCGAAAGCAGTCGCTTCCG
AATCTGGCGTGCCTTTTATTCCGAAGTCAGGGTCGGATTTTGTTGAACTAATTGGAGGTT
TGGGAGCTAAAAGGGTGCGGCAACTTTTTGAGAATGCCCGGAAAATGGCTCCATGCATCG
TTTACATAGATGAGTTAGATGCTATTGGGGGCCAACGGAAAGACTCAAACAGTTACCAGG
ACTCGTCCGAAAAAGACCGAACATTGAACCAAATATTGGTAGAAATGGACGGCATGTTAA
GCGCCCAGCATGATGTGCTTGTACTTGCTTCTACTAATAGACCTGATGTACTGGACAAGG
CAATAACAAGACCTGGTCGTTTTGATCGTCATATTTACATTGACCTGCCAACCAAAATAG
AACGTAAACAAATACTTGAGCGCCATCTTGCAACTATTACACTGGAGAACCAACCAAAGG
AATATTCTGAACAGCTGGCTACTGTAACACCTGGAATGAGTGGAGCAGATTTGGCAAATC
TTTGCAACTTAGCTGCAATCCAAGCAGCTACAGAAGGAGACAAAGTAGTGAAGGAGAAAC
ATCTGGATTATGCTGTGGAGCGAGTTATCGCAGGTGCGCCAAAGTCCTCGACAGCCGTCT
CTCCAGAAGAGCGCAAAATTGTTGCGGTCCATGAATCTGGTCACGCTCTTATGGGTTGGC
TATTAGAACACACCAGTGCACTTTCTAAGGTTTCTATTATACCAAGAACCAATGCTGCTC
TTGGCTTTTCAAGGACACTACCCACAGAAAGGCATCTTCATACTCCAGAACAGATATTGG
ACAACATGTGTATGGCCTTGGGTGGCAGGGCAGCTGAAGAGATTGTGTTTGGGAATGTGA
CACAGGGGGCTCAAGATGACTTGACCAAAGTAACAGACATGGCTTATGCTCATGTCAAAA
CATTTGGTTTTAACCCAGTAGTTGGCCCTCTATCATTTACTGAGGATGGTGATCATTCGT
TGAGGCCGTATAGTGAACGGTTGGCTACAACCATGGACAGAGAAGTAAACAAGTTAATTA
AATCTGCTTACGAGCGTGCAAAAAAAGTTCTTCAACAAAACCGTGAACTTTTGGACACTT
TAACTAGTGCTCTGTTTGAAAGGGAATCTTTAAATTTTGATGACGTTGTCATGCTAATTG
GTGCACCTGCATATGGAAATAAAGAACAGATTCAAACCGTTCCTTTTGGGCCATTTGCTT
CTGACACTCAAGAAACCGAACTTGAAACAGAAAAAGAAGAGACATAAAACATTTCAATAT
ATATTTAAGTTCACTGTTCAAGTTAGTGGCACATAAACTGCCACAAGTGCTAAAAAAGCA
GCTTAAATTTCTTTCCAAATTGCAGCGTTTTCCAAAACCGCATACAATAGTAACATGTTA
TGTTAATTAGGCGTTTTTCACATCAATTTAATTTTTTGTTTAATACTTGCTTAGCTGATT
CTTACGGTATTGATGTGTCTGAATCTTAAAATATTCAATTTTGAGTGCAGAAAGTCGAAT
ATGTTTCAGTTACTACCTTTGTTACTCTACTACTATCATCACTGTGCTGCTATTTTATGT
TTAGTTTCAGAAACTCTAATTTTTGTCACTTTTTTTCCAATCTCTAGTGTATGGCTTCGT
ACTGATGCCTACAGGTGGTAAAGTATCCGGAATTTGTTCGTTTTGTCCAGATTTCGCTGC
CGCATGCCGAACTCGGTAATGAGTTTTGCATACGACTTCGCATGCCGGATACTGTGAACA
CTACAGCCACCTTAAGAATAAAACTTTTTTGATATATAGTACATGTTTTTAAATTGATAA
AAATGTGGAATTGTCCCGAAAAAAAGTTTGTCAGTTTCCCATTTGTTAGTAATCGCATCA
TTATTTCACCATCTTTTATCTACTGTGTTTCCTAAGTTTTATTTGCAGGCTTAAGACTTA
TCTTCTATGGCATACA
| TIGRFAM |
FtsH (IPR005936) - T[256-742] 1.5E-166 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[305-575] 3.29E-63 |
| SMART |
AAA+_ATPase (IPR003593) - T[340-481] 1.6E-20 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[345-478] 2.5E-39 |
| Pfam |
Peptidase_M41 (IPR000642) - T[542-740] 4.7E-64 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[563-745] 1.31E-57 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 49.666 % | 558 | 0 |
| AFG32_HUMAN | 43.366 % | 463 | 3.64E-152 |
| YMEL1_HUMAN | 36.789 % | 318 | 6.86E-97 |