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  1. Transcript 'KH2012:KH.C6.210.v1....'

Transcript Model

Transcript Id

KH2012:KH.C6.210.v1.A.SL1-1

Possible name(s)

SNIP1

Location

KhC6 [1,899,640 / 1,903,354]

Sequences

Amino acid sequence

Length: 512

>KH.C6.210.v1.A.SL1-1
IYNMPKSDRHSQDLDTSPARKHKKSKHSSKKSKKSRHSSPESSPYLKHHKKDKYCNDKKE
DIDKIDKVKKYDSSSDVASSPERTHMKKQKRSSKDKEKKSSRNKSPEDDFSSPERKKSKK
QKRSEKDETSSSKNKHRDTINRSNSSSSPERKNSPEKRRSVENRRETSVKRDERNHKRRS
DEVTKKDEIKRREKSVERKKDDGSPHEKRRRRSRERSSRRYRSPDVAHPRRHIKEEQRDD
SYRDAGANNHHRRREDRGLREDDTRIKREEDFDRRQEELRRRRLQGGRWDDGDGNDTRRN
RTNSDFNDQRERRRNDDRRIEERNKRDREGEVEGAFKKEEEKVEKEKPNLGLSGALTADT
NTYRGVVIKYNEPVEARVPKKRWRLYPFKGTENLKILHLHRQSAYLLGRLRRIADIPIDH
PSCSKQHAVFQFRLVDVEVDGVMKRRVKPYIIDLGSANGTYVNNERIEAQRYVELKEQDL
LKFGFSSREYILLHDKADTSELGSEEEEEEGE

Nucleotide sequence

Length: 2,026

>KH2012:KH.C6.210.v1.A.SL1-1
GATATAGTTAAATTTACAACATGCCAAAATCTGACAGGCACTCTCAAGACTTGGATACTT
CACCTGCAAGAAAACATAAAAAGAGTAAACATTCTTCTAAGAAAAGTAAAAAGTCACGAC
ACAGTTCTCCTGAGTCTAGTCCATATTTGAAACATCATAAAAAAGATAAATACTGTAATG
ATAAAAAGGAAGATATTGATAAAATTGATAAAGTAAAGAAATATGACTCTTCTTCGGATG
TTGCATCTAGTCCAGAACGAACACATATGAAAAAACAGAAACGATCGTCAAAAGATAAAG
AGAAAAAATCTTCCCGAAATAAATCTCCAGAAGATGATTTTAGTAGCCCTGAGAGAAAAA
AGTCGAAAAAGCAAAAACGATCCGAAAAAGATGAGACTTCTTCGTCTAAGAACAAACATA
GAGACACTATTAATAGGTCAAATTCGTCTTCTAGTCCAGAAAGAAAAAATAGTCCGGAAA
AAAGAAGAAGTGTGGAAAATAGGAGAGAAACTTCTGTTAAGAGAGATGAGAGAAATCATA
AGAGAAGAAGTGACGAAGTCACGAAAAAAGATGAGATTAAAAGAAGAGAAAAGTCCGTAG
AGAGAAAAAAGGATGACGGAAGTCCGCATGAGAAGCGGAGAAGAAGATCAAGAGAGAGAT
CTTCACGGCGTTATCGCAGTCCAGATGTTGCGCATCCTAGGCGTCATATTAAGGAGGAGC
AGCGGGATGACTCTTACAGGGATGCAGGAGCAAATAATCATCATAGGAGGCGAGAGGACC
GAGGCCTGAGGGAGGATGATACAAGGATAAAGAGGGAAGAAGATTTTGATCGGAGGCAGG
AGGAGTTGAGAAGAAGAAGGCTGCAGGGGGGAAGATGGGACGACGGAGATGGAAATGATA
CAAGAAGAAACAGAACAAATTCAGATTTCAATGATCAAAGAGAGAGAAGGAGAAATGATG
ATAGGAGAATAGAAGAGAGAAACAAGAGGGATAGAGAAGGGGAAGTGGAAGGAGCATTTA
AAAAGGAGGAGGAAAAAGTGGAAAAAGAGAAACCGAATCTTGGACTTTCTGGAGCATTAA
CTGCAGACACAAACACTTACAGGGGTGTTGTTATCAAGTATAATGAACCAGTGGAAGCAA
GGGTCCCAAAGAAAAGGTGGAGGCTTTACCCATTTAAAGGAACCGAAAACTTAAAGATAC
TCCATCTCCATAGACAGAGTGCTTATTTATTAGGTAGGTTAAGAAGAATTGCCGATATTC
CGATAGATCATCCATCGTGCTCCAAACAACATGCTGTGTTTCAATTCCGACTTGTAGATG
TAGAAGTAGATGGGGTTATGAAACGAAGAGTGAAACCGTACATAATAGACCTTGGATCAG
CTAATGGAACATATGTAAACAATGAGAGGATTGAAGCACAAAGATATGTTGAACTAAAAG
AACAAGATCTTCTAAAGTTTGGTTTTAGTTCAAGAGAATATATCTTGCTTCATGATAAAG
CTGATACAAGTGAACTTGGAAGTGAGGAAGAAGAAGAAGAAGGGGAATGAAGAGAGAGGT
AAAAGAAAAAGGCAAAACAAGAGAAGCTCCAAACTGATAAAGGCAAAATGAGAGAGCTCC
GAATGCAAAAAAGGGAAATAATGGGCTAGAATGAACGCCACCTTATTGCTAACTGTTAAA
GAGCTCTAGAGAAAAACTGGGATTTCTGATTTTATGCACAATGTTTTGAGAATCTGACTA
TAGTGTTTCCTTTATAGTTTTATTACTTGCATTTGGGGTTACATTTTACAATCAAAGTAA
TAATGTTTAACACTGGCCGAACGTTTTACCTTTGTAAAGTGATATTGGTTAACATCACGT
CTTCTTGCAAACATTGGTCAAAAATGATCATTTTCTCACTTCAATGTATTGTGATATACC
CTGGAATTTTTATGTGATTTGCCATTTTTAATGTCTGAGCTATTGTTGCTAGACCGTTTC
CAATATTTTGGTACATTACTGCCTTAATAATCATTCGAATTTTTAG

InterProScan

SUPERFAMILY
SMAD_FHA_dom_sf (IPR008984) - T[360-492] 6.5E-25
CDD
FHA_dom (IPR000253) - T[382-494] 1.82476E-23
SMART
FHA_dom (IPR000253) - T[404-467] 2.2E-13
ProSiteProfiles
FHA_dom (IPR000253) - T[405-467] 11.544
Pfam
FHA_dom (IPR000253) - T[405-484] 9.5E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNIP1_HUMAN 53.595 % 278 7.02E-89