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  1. Transcript 'KH2012:KH.C6.171.v1....'

Transcript Model

Transcript Id

KH2012:KH.C6.171.v1.A.SL1-1

Possible name(s)

CMSS1; DDX39A; DDX39B

Location

KhC6 [865,241 / 907,297]

Sequences

Amino acid sequence

Length: 265

>KH.C6.171.v1.A.SL1-1
LFKMADNLSEEWWQTAVSDEEEGASDDGERKEMKRKLNEPTSGIVVSENEEPEVKKKKRR
NRKRITEAKLPDQGDSPTMLRDYLKLHFSKLSKLEFEDISLTESNFTACNIDKEHTTTSY
FKQIAPKWHRLSTAHSHKMSPLIIVVCGNALRASKFNTEAKTFKGKDARSIKLFARHMKI
DDQIKLLRENVIHFAVGTPERIRSLILQDALSLEHTRAFVIDWNWRDVKLKRLIDIREAR
ASLMNLLKDCVIPACKKHHVKIGLF

Nucleotide sequence

Length: 956

>KH2012:KH.C6.171.v1.A.SL1-1
GTTGACTGTATAGGGCAAAGTAGTTTTCAAACATTGTATAACTTTTCAAGATGGCCGACA
ACCTTAGTGAAGAATGGTGGCAAACGGCAGTTTCTGATGAAGAAGAAGGCGCAAGTGATG
ATGGTGAACGAAAAGAAATGAAACGTAAACTGAACGAACCGACTTCAGGAATAGTAGTTT
CAGAAAACGAGGAACCAGAAGTGAAAAAGAAAAAAAGGCGGAACAGAAAAAGAATTACTG
AAGCTAAGCTTCCCGATCAAGGGGATTCACCCACGATGTTACGAGATTATCTCAAACTTC
ACTTCAGTAAATTATCCAAGCTCGAATTTGAGGATATTTCGCTAACAGAATCCAATTTCA
CAGCATGCAATATCGACAAAGAACATACTACCACGTCGTATTTTAAACAAATCGCCCCCA
AGTGGCATCGTTTAAGCACAGCTCACAGTCACAAGATGTCGCCTCTGATCATCGTGGTTT
GTGGCAACGCACTTCGAGCGTCGAAATTTAACACAGAAGCAAAGACTTTTAAGGGCAAAG
ATGCAAGGTCGATAAAGCTATTTGCGCGCCACATGAAGATCGACGATCAAATCAAACTTC
TGCGGGAAAACGTCATTCATTTCGCCGTCGGCACACCGGAAAGAATCCGATCTCTTATCC
TACAAGATGCTCTCAGTTTAGAACACACTCGAGCGTTTGTCATCGATTGGAATTGGAGAG
ATGTAAAACTAAAGCGTTTAATTGACATACGAGAGGCTCGTGCGTCGTTGATGAATTTGT
TAAAAGATTGCGTGATCCCAGCTTGTAAGAAACACCATGTAAAAATCGGGTTGTTTTGAT
TTGAATTTGTGCAAAAAATGAGGTTTTCTGACGTCATACAGGTTCAAAATTTGCTTGTGT
GCATGGCCCGTTTTTTTCAGTAAATGGTTTACGTTCATGCAATAAATTGCCATTTT

InterProScan

PANTHER
Cms1 (IPR032704) - T[20-265] 6.3E-64
Pfam
Cms1 (IPR032704) - T[47-262] 3.9E-30
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[136-222] 3.99E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CMS1_HUMAN 35.231 % 165 8.13E-50