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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R14....' > 
  2. Transcript 'KH2012:KH.L18.13.v1....' > 
  3. Transcript 'Haaura.CG.MTP2014.S5...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  5. Transcript 'KH2012:KH.C5.567.v1....'

Transcript Model

Transcript Id

KH2012:KH.C5.567.v1.A.ND1-1

Possible name(s)

DEGS1; DEGS2

Gene model

KH2012:KH.C5.567

Location

KhC5 [3,121,643 / 3,123,594]

Sequences

Amino acid sequence

Length: 386

>KH.C5.567.v1.A.ND1-1
VDILWSVKMGTKVSRNDFEWVYTDQPHGDRRRAMLKKYPQIKKLFCIDAHFKYVVAAMVA
AQVIACYFVKDMSWPWILALAYFFGGTINHSLTLAIHDISHNTAYGYQHAKWNRYFGMFA
NLPIGVPMSISFKKYHIDHHRYLGGDVLDVDLPTPIEGYLFRNSFLKLIWLILNPLFYVL
RPLAVNPKPLTVLELHNAVIQVIFDGLIMYFFGYKAVLYLVVGTLISMGIHPITGHFISE
HYMYTKGHETYSYYGILNLITFNVGYHMEHHDFPAIPSSKLPLMKKIAPDFYDDLPSYTS
WCKVLWDFVFDPAIGPFARVRREIELEQSKMQLSNGNRHANGVIGSEVTKTHLSNGNGHS
NGVLSNGKMLNGYHQNGVLSNGDSAE

Nucleotide sequence

Length: 1,951

>KH2012:KH.C5.567.v1.A.ND1-1
TGTGCCGTTATAAGTTGATATACTGTGGAGTGTCAAAATGGGTACTAAAGTATCGCGTAA
CGATTTTGAATGGGTTTACACCGACCAACCGCACGGAGATCGAAGAAGAGCAATGCTTAA
GAAGTATCCTCAAATCAAGAAGCTATTCTGTATCGACGCACACTTCAAATACGTGGTGGC
AGCCATGGTAGCCGCGCAAGTTATAGCGTGTTACTTTGTGAAGGACATGAGCTGGCCATG
GATATTGGCCCTTGCTTATTTCTTTGGTGGTACCATTAATCATTCACTTACACTTGCTAT
CCATGATATATCCCATAACACTGCATATGGCTACCAGCATGCCAAGTGGAATAGATATTT
CGGCATGTTTGCCAATTTACCAATTGGTGTGCCTATGTCAATCAGTTTTAAAAAATATCA
CATTGATCATCATAGATATCTAGGTGGAGATGTACTGGATGTTGATCTGCCGACACCAAT
AGAAGGATATTTATTCCGGAACAGTTTTTTGAAACTAATTTGGTTAATTTTGAACCCACT
TTTCTACGTACTGAGACCATTAGCTGTAAATCCCAAACCACTGACAGTACTGGAGCTTCA
CAATGCTGTTATTCAAGTTATATTCGATGGACTCATAATGTACTTCTTTGGGTATAAAGC
TGTACTTTATCTGGTAGTTGGCACTTTGATTTCAATGGGAATCCACCCTATTACCGGGCA
CTTTATTTCAGAGCATTACATGTACACAAAAGGCCATGAAACTTATTCTTATTATGGAAT
TTTGAATCTTATAACATTTAATGTAGGATATCATATGGAGCATCATGATTTTCCTGCCAT
TCCCAGTTCAAAGTTGCCGCTGATGAAAAAAATTGCTCCCGATTTTTACGATGACTTGCC
AAGCTATACTTCATGGTGCAAGGTGCTGTGGGACTTTGTTTTTGATCCAGCTATTGGACC
CTTTGCCAGGGTAAGAAGAGAAATTGAGTTAGAGCAATCGAAGATGCAACTGTCAAATGG
TAATAGGCATGCAAATGGAGTTATAGGCTCAGAAGTAACCAAGACACACCTATCAAATGG
AAATGGTCATTCAAATGGTGTTTTAAGCAATGGAAAAATGTTGAATGGTTACCACCAGAA
TGGTGTTCTATCAAATGGTGATTCAGCCGAATAATTTTTTTAAGGAAATAAGTTTTGTAA
GGTTTAAGATCTGTATATTTCACTAATGGTGACATTAATTTGTTAACATACTTTTTATAT
AATGAAATGAATAATAATCAATATTGTCCTGATTGCTTTATATATATATATTGTGGGTTG
ACTTTTTCAATGACGTTTTATTCTTATTGTGAATGAATTTAGGAAAAGACGCCTGTTTTT
TCGTTCGTGTTTTTTGTTTCTAATTTAGACAATGTAGCCTTATTTTCGGTTTCAATTTTG
ATTTTAATCATGTTGTTTGCTTATCAAAGCAGTGCTTTTTCTCTGACCGTATTATTTCTG
TCATTATAAACCTATATATTTGAAACACATTGAAAATAGTTATAAGCTTGATACCTTTTA
TGAAGTCTGGTTTATATGCAGTTTTCTGTACCTCTACTGTTGTGTCACATATTAGATTAG
TTCAGGTTTACAATGGAAAATGTCTAAATATAAAGAAATATAATATAATATATATATAAC
ATGTATTTGATTGTATACACATCAGGAACTTAATTCTTGTTTTACTGTACGTGCAAAAAA
CTGTACAAAATATATATTGCTAAAAATGTCCACAGAGTTTTTTTTGTTTTTTTGGAAAAG
CAGCTGTGTAGCAAAACTGATTAAAAATTTGCCGCAATAGCCTATATTACGTAAGAACTT
TGTACAAAGAAAAACTAGTACATTTGTCATTCATAAATTTGATTATTAAACAATACCTAG
TTTTCCAATTTACAAAACAAATTAATCGATG

InterProScan

PIRSF
DES1/DES2 (IPR011388) - T[6-341] 8.1E-154
SMART
Sphingolipid_d4-desaturase_N (IPR013866) - T[13-51] 2.3E-18
Pfam
Sphingolipid_d4-desaturase_N (IPR013866) - T[14-49] 4.6E-19
CDD
DES1/DES2 (IPR011388) - T[34-323] 1.60573E-154
Pfam
FA_desaturase_dom (IPR005804) - T[75-297] 5.7E-23

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DEGS1_HUMAN 61.146 % 411 4.97E-144
DEGS2_HUMAN 56.966 % 401 3.16E-140