- Transcript 'KH2012:KH.C5.411.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.411.v1.R.ND1-1
Possible name(s)
NGLY1; UBXN6
Gene model
Location
KhC5 [1,910,900 / 1,916,895]
Amino acid sequence
Length: 600
>KH.C5.411.v1.R.ND1-1
SMDSEGVQALIRNKEDDFKIVLNTLYKIARNILQNPLEEKFRSIKIVSKAFQEKILPFDG
AIQCLLEMGFKEDGDRFTLFSETKLDDLEEIYKQLMNAEKVTLKKNLSPSLKKSQEEILP
RLKSHLRHTAMYENKSLQQKARAVIPIVELNTRTEKRLREETNQEFSNYQYCFLLELLHW
FKYEFFTWTNQPPCTSCPESEKYSIGMLPPSDEDLLWGASRVEGYTCSNCNKILRFPRYN
HPEKLLETRTGRCGEWANCFTLICKSMAYDARHVLDWTDHVWTEVFIVSMDRWLHCDSCE
NVCDKPLMYEQGWNKKLSLIVAADHEHIVDVTRRYTRDVNAVEIRRNKMFDSDWLKSTIR
ELNETTRLSMTQARKEKLRNRQLNEEKELSSVKTETGGEYEGRTSGSLAWRLARGETDKV
KDGKSKMETCEVIRPSEDEIKSGMLTLEYSSSLDKYTRITDNNKSYDGWKSLVYCHQDVM
KKVEQDWKQTYICRKEDTSVGYISWRVELPNTCLLTHVELCVKDSVFEQGHVSWLLTTDK
TTHIVKSGTTEKIDLTKSKSQFFSIHAFLRGENWQHAQLFREPLNTSEISFNVKVLWKQK
Nucleotide sequence
Length: 2,172
>KH2012:KH.C5.411.v1.R.ND1-1
GTGCCTCTATAACTAATTGTGTAAAAAAGTAATCAATGGATTCCGAAGGTGTACAAGCTT
TAATAAGAAACAAAGAAGACGATTTTAAAATTGTTTTAAATACTTTATACAAAATTGCAA
GAAATATTTTACAAAATCCTTTAGAAGAGAAGTTTCGTTCGATTAAAATTGTCAGCAAAG
CTTTTCAAGAAAAAATCTTACCATTTGATGGCGCTATACAGTGTCTGTTGGAAATGGGGT
TTAAGGAAGATGGGGATAGGTTCACATTGTTTTCTGAAACCAAACTCGACGATTTAGAAG
AAATATACAAACAATTAATGAATGCTGAGAAGGTCACATTAAAGAAGAATTTATCACCAA
GTTTAAAAAAATCTCAGGAAGAAATCTTACCAAGATTAAAATCTCATTTACGACATACAG
CTATGTATGAAAATAAATCTCTTCAGCAAAAAGCACGCGCTGTCATTCCTATAGTTGAAT
TAAACACTAGAACTGAAAAAAGGCTCAGAGAAGAAACTAATCAAGAATTTTCAAACTACC
AATATTGCTTCTTACTTGAGCTACTACATTGGTTCAAGTATGAATTCTTTACTTGGACAA
ACCAACCACCATGTACGAGTTGTCCTGAATCAGAAAAATATTCAATAGGTATGTTGCCAC
CATCAGATGAAGATTTATTATGGGGAGCTTCAAGGGTTGAAGGATACACTTGTTCTAATT
GCAATAAAATTCTCCGCTTTCCAAGATACAACCACCCAGAGAAATTACTTGAGACGAGAA
CTGGTAGATGTGGGGAATGGGCAAATTGTTTTACACTTATATGTAAATCAATGGCTTATG
ATGCAAGGCATGTCTTAGATTGGACAGACCATGTGTGGACAGAGGTTTTTATAGTAAGCA
TGGATCGATGGCTACATTGTGATTCTTGCGAAAATGTTTGTGACAAACCACTCATGTATG
AACAAGGTTGGAACAAGAAGTTGTCACTTATAGTTGCCGCTGATCACGAGCATATTGTTG
ATGTCACGCGAAGATACACCCGCGATGTAAATGCTGTTGAAATTCGAAGAAACAAAATGT
TTGATTCTGATTGGTTGAAATCTACAATCCGAGAATTAAACGAAACAACACGTTTATCAA
TGACACAAGCAAGAAAGGAAAAACTCAGAAATCGTCAGTTAAATGAAGAAAAGGAATTGT
CTTCGGTGAAAACAGAAACTGGTGGCGAATATGAAGGTAGAACATCTGGATCGTTGGCCT
GGAGGTTGGCAAGGGGGGAGACTGATAAAGTTAAGGATGGAAAAAGTAAGATGGAAACTT
GTGAGGTTATAAGGCCAAGTGAAGATGAAATAAAAAGTGGAATGTTGACTTTGGAATATT
CTTCAAGTTTAGATAAATACACAAGAATAACTGACAACAATAAATCATATGATGGTTGGA
AATCGTTGGTTTATTGCCATCAAGATGTAATGAAAAAGGTGGAGCAAGATTGGAAACAGA
CATACATCTGCAGAAAGGAAGATACAAGTGTGGGTTATATTTCATGGCGTGTTGAGTTAC
CTAATACATGCTTACTTACTCATGTTGAACTTTGTGTGAAAGATAGTGTATTTGAACAAG
GTCATGTGTCATGGCTGCTTACTACAGATAAAACAACCCATATTGTTAAGTCAGGGACAA
CTGAAAAAATTGATTTGACAAAATCCAAGTCACAATTTTTTTCAATCCATGCGTTTCTAA
GAGGGGAAAACTGGCAACACGCTCAGCTATTCCGTGAACCTCTTAATACATCAGAAATAT
CTTTCAATGTAAAGGTGTTATGGAAGCAAAAATAGGTTTTCACTGTAAAAATGTATTTTT
TTAGGTGTAATCTTGTTAAAGAAATTTTGTATATAGTATAGTAGGGTGAAGGAAGATGGG
ACACCTTTAGCACATAATATTCAAATATCTGGATCTTGTTTAAAAAAAATAAAAACGGTC
TATGTGGGAGCCGTGAGAATATAGTTTTATAATTCTTTAAATGTTCTTCGTTTACTACTA
AATGGGAAAAGAAAATAGAGTTAAAATGTGTCCCATCTTCCCCCACCCTACTATATATGT
TGAGCTTTTAAAGGTATAGCTGTACTAGACAATAATACTAACAGATATTTATTACCAAGA
ATAAACCAGACC
| SUPERFAMILY |
PUB-like_dom_sf (IPR036339) - T[9-103] 3.53E-22 |
| Pfam |
PUB_domain (IPR018997) - T[16-91] 7.5E-23 |
| SMART |
PUB_domain (IPR018997) - T[20-81] 4.9E-14 |
| SMART |
Transglutaminase-like (IPR002931) - T[245-300] 7.3E-10 |
| Pfam |
Rad4/PNGase_transGLS-fold (IPR018325) - T[280-380] 4.2E-10 |
| ProSiteProfiles |
Peptide_N_glycanase_PAW_dom (IPR006588) - T[399-600] 18.146 |
| Pfam |
Peptide_N_glycanase_PAW_dom (IPR006588) - T[402-595] 4.5E-56 |
| Gene3D |
PAW_sf (IPR038680) - T[426-600] 4.0E-42 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[429-598] 3.7E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NGLY1_HUMAN | 37.616 % | 396 | 2.09E-130 |