- Transcript 'KH2012:KH.C5.181.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.181.v1.A.nonSL5-1
Possible name(s)
PARN; TOE1
Gene model
Location
KhC5 [877,134 / 878,979]
Amino acid sequence
Length: 452
>KH.C5.181.v1.A.nonSL5-1
HLSEKVMEVQVIEVTKGNLEPLWSKIVKDVKNSIFIALDTEMSGLGPQAQLMKSDLEQRY
QGISAAASSRSIISLGLACFEPYSGKEPLAYNVTVYNIIVLCSDPFTIDPGAVSFLVNHG
FNFNKQFCNGISYYKGNDRPKEKDKLTMRSLFAEIIKLRKPLVLHNGLVDLVFLYNSLYA
ELPGTLNSFMADVCEIFPAGIYDCKYIAEFCDRLTASFLLYAFKKTQWKNEALAAAGKIC
LKVHFKMESEWTVTVPLNVGGNKAISHKNIKGVEICEKYAAYGWCRNGILCKKVHDIDTI
VQFHKTSKQKRKRKRTKSSSDTKDVQTLMEQDEIKPTEENANPIKRAVFDNSTNTQGHRS
SLDAFMTGYIFATFIASQYTPTPLNENSTTEKENDKKEKFTSEIQYLSRENKTKIVNKLY
LSGKPIPLQVTKSKYSKTSKNHNEKLLKVYLS
Nucleotide sequence
Length: 1,845
>KH2012:KH.C5.181.v1.A.nonSL5-1
TCTAACATTTAAGTGAAAAAGTAATGGAGGTACAAGTTATAGAAGTAACGAAAGGAAATC
TTGAGCCATTATGGAGTAAAATCGTGAAAGATGTGAAAAACTCCATTTTTATTGCACTAG
ATACAGAAATGAGCGGATTAGGACCCCAAGCCCAGCTAATGAAGTCTGACTTGGAGCAAA
GGTATCAAGGAATTTCTGCAGCAGCGTCTTCCCGTTCTATTATCTCTCTTGGACTTGCTT
GTTTTGAGCCATATTCTGGAAAAGAACCGCTGGCCTATAATGTAACTGTGTACAATATTA
TCGTATTATGTTCTGACCCATTCACCATCGACCCTGGTGCAGTAAGTTTCCTTGTTAACC
ATGGCTTTAATTTTAACAAACAGTTCTGTAACGGCATCAGTTATTACAAAGGCAATGATC
GGCCGAAAGAGAAAGACAAACTTACAATGCGATCTTTGTTTGCGGAAATTATTAAACTAA
GAAAACCGCTTGTGTTGCACAATGGGCTTGTGGACTTGGTGTTTTTGTACAACTCACTCT
ATGCAGAGTTGCCAGGGACCTTAAACTCATTCATGGCAGATGTGTGCGAGATTTTCCCTG
CTGGTATATACGACTGCAAATATATAGCAGAGTTTTGTGATCGTTTAACAGCATCCTTTC
TGCTTTATGCGTTCAAAAAAACCCAGTGGAAAAATGAGGCACTAGCGGCTGCTGGAAAAA
TTTGTTTAAAAGTTCACTTTAAAATGGAAAGTGAGTGGACCGTTACTGTGCCACTAAATG
TGGGTGGTAATAAGGCAATTAGTCACAAAAATATCAAAGGAGTTGAAATATGTGAGAAAT
ATGCTGCATATGGTTGGTGTAGGAATGGAATTTTGTGTAAAAAGGTACACGATATTGACA
CTATTGTACAGTTTCACAAGACTAGTAAGCAAAAACGTAAACGTAAACGAACAAAAAGCA
GTTCAGATACCAAAGACGTGCAAACACTTATGGAACAAGATGAAATTAAACCAACTGAAG
AAAATGCAAACCCCATTAAAAGGGCTGTCTTTGACAATTCAACCAACACACAGGGTCATA
GGTCTAGTTTGGATGCTTTTATGACAGGATACATTTTTGCCACCTTTATAGCTTCACAAT
ATACACCAACACCCCTTAATGAAAACTCAACTACAGAAAAGGAAAACGATAAAAAAGAAA
AATTCACATCAGAAATTCAATATTTGTCAAGGGAAAACAAGACCAAAATTGTCAACAAGT
TGTATTTAAGTGGTAAACCAATACCGTTGCAAGTTACAAAGAGCAAGTATTCAAAAACTT
CAAAAAATCACAATGAAAAGCTATTGAAAGTATATTTGTCATGATATATCTCATGGTATG
CTTTGGCTTCTCATTGATACTGATTTTAAAACGCATAAGTACATCATACCTATAAGCCAT
TTAGTATATAAATATATATATATGCTAAATCTACTTTGCCCCAATAGTCTGTCATCTGTT
TGGTTTTATAAATCTACTTTTCTATCTACTTGACTAGAAATCACTAGGGTATAATACATA
ACGATGAATCTACAGTACTATTTGGAGACTACAACACATTTTTTTCACTTTTAAGTTCTT
GTTTGTATTTTGCATGTGAGTTTTAGCAAATTTTGTCCTTTCTATGTATTGTTTGCTAAA
AAATCAAACAAGGAGATCTTTTCTTTAATCCGAATCTAATAATATTATTATGACTTCTCA
TTTAAAAGTGATATTTAGTTTATTAGTACTTAAACATATGAACTTGACCATGTGATGTTG
AATTTTATGTTTTACTTAACTGGCCATGTTTTTTCATTTTTTTAG
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[11-234] 7.94E-47 - T[358-374] 7.94E-47 |
| Gene3D |
RNaseH_sf (IPR036397) - T[12-252] 1.9E-52 |
| Pfam |
RNase_CAF1 (IPR006941) - T[14-147] 6.1E-36 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[268-297] 2.35E-8 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[270-298] 11.253 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TOE1_HUMAN | 35.569 % | 293 | 2.57E-94 |
