- Transcript 'KH2012:KH.C5.175.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.175.v1.A.nonSL2-1
Possible name(s)
DDX10; DDX18; DDX31
Gene model
Location
KhC5 [3,149,007 / 3,152,667]
Amino acid sequence
Length: 663
>KH.C5.175.v1.A.nonSL2-1
LNDSVDGKQSENSTKIDTTKVNSKVDVKVNNGYKLKPTKQGKIRSSLFSANPEIPALNLP
VVNDAPKKTIISAPVTSFSHLNLHLGIESYISEKLEFTDMTEVQSKSLPVLLDGKDALIR
SQTGSGKTIAYALAVVQNLQGLVPRITRMDGPAALVFVPTRELALQSYEVFSRLTLPVRR
IVATCVVGGQKRKSEKARLRKGSNIIVSTPGRFIDHIENTHCLSLAKVKWIIFDEADRLL
DMGFQKDINKILTAVKEQTGTKQQVVLLSATLTKGVENLVNLALTNPVHIETEAGKAKEK
NAQIFVDPLTGLNVEKVPLPSKLTQSVTIVPSKLRLVTLVAFINKKCVIEGDGKLLVFLS
CRDSVEFHFRLLKNMKGVLNNAISDKKLGFFQLHGGMTQPERNSTINGYRCAKSGVLLCT
DVASRGLDIPKVDWVVQHTSPGNPVDYVHRVGRTARAGKAGHALLILSPAEVEYVKLLTK
FDIVAKELKLEEILFGLLEKKQQSINYKIRIQLGKEEASKVHRELEELVHGDKSLKEFAG
KAFVAYVRSYATYPAALKHIFHVQNLHLGHVAKSFALQEAPSEFLHNLKKTVGAHAIRQI
RRKKSNMENSETENNKTDDITVEKEIKKKGTKRHPIVAKFDLMSEFSSGITDFSPSAKKK
KVK
Nucleotide sequence
Length: 2,681
>KH2012:KH.C5.175.v1.A.nonSL2-1
TTAAATGACAGTGTTGATGGAAAACAGTCTGAAAACTCCACTAAAATAGACACAACAAAA
GTTAACAGTAAAGTTGATGTAAAAGTCAACAATGGATACAAGTTAAAACCTACAAAACAA
GGAAAAATTCGAAGTTCTTTGTTTTCTGCAAATCCAGAAATTCCAGCTCTAAATTTACCT
GTTGTAAATGATGCTCCTAAAAAAACGATCATTTCTGCACCTGTCACTTCTTTTTCCCAT
CTAAATCTACATCTAGGAATCGAAAGTTACATCTCAGAAAAGTTAGAGTTCACTGACATG
ACAGAAGTGCAATCGAAATCCTTACCTGTGCTTTTGGATGGTAAAGATGCATTGATTCGT
TCCCAAACTGGCTCAGGGAAAACCATTGCGTATGCTCTTGCAGTGGTTCAAAATCTGCAA
GGGCTGGTGCCCAGGATCACAAGAATGGATGGGCCAGCTGCACTTGTGTTTGTGCCAACA
CGGGAGCTTGCCCTTCAAAGTTATGAGGTCTTCAGTCGCCTTACACTTCCAGTGAGAAGA
ATTGTAGCCACTTGTGTAGTGGGAGGGCAGAAACGGAAATCAGAAAAGGCGAGATTAAGA
AAAGGGTCAAATATTATCGTTTCCACACCGGGCAGATTTATTGACCATATTGAAAATACT
CACTGCTTATCTTTGGCAAAAGTGAAATGGATAATCTTTGATGAGGCTGACAGATTGTTA
GATATGGGATTTCAAAAGGACATTAATAAGATTTTAACTGCAGTCAAAGAGCAAACTGGA
ACCAAACAACAAGTAGTCTTGCTATCTGCAACCCTAACAAAAGGCGTCGAAAATCTTGTC
AATTTAGCGCTGACCAATCCAGTACACATTGAAACTGAGGCTGGAAAAGCAAAAGAAAAA
AATGCACAGATTTTTGTTGATCCTTTGACTGGTTTAAATGTGGAAAAAGTGCCTTTACCA
AGCAAGTTAACCCAGTCTGTTACAATAGTACCAAGCAAACTGCGTCTTGTTACACTAGTT
GCATTTATCAACAAGAAATGCGTTATAGAGGGTGATGGGAAACTACTTGTCTTCCTATCT
TGTCGAGATTCCGTGGAATTTCACTTTAGGTTGTTGAAAAACATGAAAGGGGTCTTAAAT
AATGCAATAAGTGATAAAAAACTAGGATTCTTTCAGCTTCATGGCGGCATGACACAGCCT
GAAAGGAACAGCACCATTAACGGATACAGATGCGCAAAGTCGGGTGTTCTTCTATGTACA
GATGTGGCTTCTAGGGGTTTGGATATTCCAAAGGTGGATTGGGTGGTGCAACATACAAGT
CCTGGAAATCCCGTAGATTACGTACATAGGGTTGGGAGAACTGCTCGTGCTGGCAAAGCT
GGGCATGCCTTGCTTATCCTGAGCCCAGCAGAAGTTGAATATGTGAAACTACTGACAAAG
TTTGACATTGTAGCAAAGGAGTTAAAGCTTGAAGAAATTCTGTTTGGTTTGCTAGAAAAG
AAACAACAAAGTATTAATTATAAAATAAGAATCCAACTTGGAAAAGAAGAAGCATCAAAA
GTTCATCGTGAGCTTGAAGAGTTGGTTCACGGTGATAAAAGTTTGAAGGAATTTGCAGGA
AAAGCTTTTGTGGCATATGTGCGCTCGTATGCCACCTACCCAGCTGCTCTTAAGCACATA
TTTCATGTGCAGAATTTACATTTAGGTCATGTAGCTAAAAGCTTTGCACTCCAGGAAGCA
CCGTCCGAGTTTCTACACAATTTGAAAAAGACAGTTGGGGCACATGCAATCCGTCAAATT
AGGAGAAAAAAATCGAACATGGAAAATTCTGAAACTGAAAACAACAAAACGGATGATATA
ACTGTAGAGAAAGAAATTAAGAAGAAGGGCACAAAACGTCATCCAATTGTCGCTAAGTTT
GACTTAATGTCAGAATTCAGCAGTGGTATCACTGACTTCAGTCCTTCTGCTAAGAAGAAA
AAAGTCAAATAATCTGCGGGGTGTTTGTGAATAAAATACCTTAAACTAGAAATTGCCTTT
CTGGTAAAAACGTAAATTTTATTGTACCAACGTTATGCTCGCTATCTGGCGAGACGTCAT
CAGAGTATAAAATTCTTTTTACGGTAAAGTTTATTTTTATGACAAATCAAATGTGCAGCG
TTTACACAGTTAACTTAAAAAAACAGTGAGAATACATCAACATTATAGTAACAGTGAGAC
ATAACAGTGGCCTATTTAGTATTATCACTTTTTTACTTTTAACAGCCAGTGTTAAAAATA
ATCAAGTGGACAGATGTAGCATCAGGAATATAAAGCATGAGCATCCTGGAAATATTTAAT
ATATGAACATGGTACCGTACATGAAAATCTATGCTCCATTGGGTAGGTACTTTGTATTAC
AATATGATACTGAGAAAATGGATGGATTTTAGTAATTTACATTTTTTATATGAACTTAAA
TATAACGAATTTATATCTTATGTCATGGCATGCACATTTGCAACCACCATATTATATTTG
TAGGTTCAATACATAATATGATTTCAATCAGAGTTCGAATCACTGCTGACTCCATCCATC
ATAAAACTTTCCATTTGTTGAAAATCTCGCTCAAGTTTTCCACCTTCCTCTTGTTGCCAT
GGAGAGGCAGAGAGAGCAGCTCCCAAGCTGCAGAAGAGAAA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[76-105] 7.906 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[96-305] 9.9E-48 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[101-279] 6.1E-46 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[108-290] 30.717 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[150-288] 6.56E-62 - T[320-478] 6.56E-62 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[232-240] . |
| CDD |
Helicase_C (IPR001650) - T[322-466] 3.64496E-26 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[335-501] 18.954 |
| Pfam |
Helicase_C (IPR001650) - T[349-458] 6.2E-21 |
| SMART |
Helicase_C (IPR001650) - T[373-458] 2.5E-24 |
| SMART |
DUF4217 (IPR025313) - T[520-585] 1.0E-26 |
| Pfam |
DUF4217 (IPR025313) - T[522-582] 4.3E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX10_HUMAN | 32.051 % | 232 | 9.4E-66 |
| DDX18_HUMAN | 35.294 % | 276 | 1.95E-83 |
| DDX31_HUMAN | 44.019 % | 503 | 1.85E-168 |