Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C4.529.v1.A.SL1-1

Possible name(s)

KH.C4.529

Gene model

KH2012:KH.C4.529

Location

KhC4 [4,391,352 / 4,391,977]

Sequences

Amino acid sequence

Length: 151

>KH.C4.529.v1.A.SL1-1
VGVKMFLTNVNLRWRHVIRKPDKWWRVQRLKEQAKHYFHRSMRNRYGLASTQIRRSLMFQ
TKARVLMPYVRNKLRDDRLNAACEEHNARAIETKIALRTAKVALNKHMLTILAIYEPRTF
KSLIELAQRTRIEQFNSSHMQLPDRCFTKEI

Nucleotide sequence

Length: 625

>KH2012:KH.C4.529.v1.A.SL1-1
AGATCACTCTTTCCAAGTCGTAAGGTGGTATATTGACGCATATATAAGTTGGTGTAAAAA
TGTTTCTGACGAACGTGAACTTACGATGGAGACATGTGATTCGTAAACCCGATAAATGGT
GGCGTGTGCAAAGGTTAAAAGAACAAGCAAAACATTATTTCCACAGAAGCATGAGGAACC
GATATGGTTTGGCTTCCACACAAATCCGCAGAAGTTTAATGTTTCAAACCAAGGCAAGAG
TCTTGATGCCATATGTTCGAAATAAGTTGAGAGATGACAGATTGAACGCAGCGTGTGAAG
AACACAACGCAAGAGCCATAGAAACAAAAATTGCGTTACGAACGGCGAAAGTTGCACTCA
ACAAACACATGTTGACTATACTAGCAATATACGAACCGAGGACGTTTAAAAGTCTTATCG
AACTGGCGCAACGGACAAGAATTGAACAATTCAATTCAAGTCACATGCAGTTACCTGATA
GATGTTTCACAAAAGAAATCTAAACATTGTAATACTAAAACTGCAACAACTAAAATATGT
TGTGTATCTTTCTATGTAAACAATTTTGCTGCTAAGTTTGGAATAATTCAGTTTTTAAAT
TGCTATTGAATAATTCCTTTTTCAG

InterProScan

Pfam	Ribosomal_L20 (IPR005813) - T[17-123] 8.7E-14
SUPERFAMILY	Ribosomal_protein_L20_C (IPR035566) - T[17-128] 1.29E-14
PANTHER	Ribosomal_L20 (IPR005813) - T[19-135] 5.6E-21
Gene3D	Ribosomal_protein_L20_C (IPR035566) - T[72-132] 1.3E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value