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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L19.3.v2.A...' > 
  2. Transcript 'KH2012:KH.C3.896.v1....' > 
  3. Transcript 'Boleac.CG.SB_v3.S489...' > 
  4. Transcript 'KH2012:KH.L19.3.v2.A...' > 
  5. Transcript 'KH2012:KH.C4.420.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.420.v1.A.nonSL9-1

Possible name(s)

LSM7; LSM8; SNRPG

Gene model

KH2012:KH.C4.420

Location

KhC4 [1,755,563 / 1,756,251]

Sequences

Amino acid sequence

Length: 85

>KH.C4.420.v1.A.nonSL9-1
YNFVSRLIEMSKAHPPELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGIGKRKD
GSVEKIGMVVVRGNSVLMMEAVDRI

Nucleotide sequence

Length: 688

>KH2012:KH.C4.420.v1.A.nonSL9-1
CTACAACTTTGTATCCAGACTAATCGAAATGAGCAAGGCGCACCCTCCTGAGCTTAAAAA
GTTTATGGACAAGAAGTTGGATTTAAAATTAAATGGCGGACGAAGCATTCAGGGAATTCT
ACGAGGATTTGATCCGTTCATGAACTTAGTTATTGACGATGGTATAGGCAAAAGAAAGGA
CGGTTCAGTTGAAAAGATCGGTATGGTTGTCGTGCGCGGAAACTCTGTATTAATGATGGA
GGCTGTGGACCGGATATAGTCGAATAATCAAAGGCTTATCCGTGGTAAACAATCATTAAG
AGTTCTGTTATTCAAACATAAGAATTCAATTAATATAGAAAGCGACATTATTATTCATCG
TAGTGTCAACATTTTGGAACTTCTTTGTTATGTTCAATATACATTTTCTAATTTGATTTC
AATTCACTACTCCCAATTAAATCATACATGTTTTTGTTGAATGTGTCTCTGTTTTCTATG
GTCACTTTATTATCATTGACAAATACAACTTTTATATTTGACCTACCTGTCTCGCTGTCT
GAATGTTGTGTTTTGCCGTTGTGTCTTACATGTTAAGCTGGAAGTAACAAATTTAACTCA
AAATTGAAGAATGGCCAAAAGTAACTACAGATCTTAGGTTTTTTTTTGAATGTCTTTTCG
AGAAAATTAGTCACTTTAATTTAATTAG

InterProScan

CDD
Sm_G (IPR034098) - T[14-83] 1.88292E-37
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[16-83] 9.0E-18
SMART
LSM_dom_euk/arc (IPR001163) - T[16-81] 3.9E-20
Pfam
LSM_dom_euk/arc (IPR001163) - T[17-80] 3.3E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUXG_HUMAN 71.053 % 117 1.43E-36
RUXGL_HUMAN 67.105 % 112 2.03E-34