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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C14.414.v2...' > 
  2. Transcript 'KH2012:KH.L20.19.v2....' > 
  3. Transcript 'KH2012:KH.L20.19.v1....' > 
  4. Clone 'AHC0AAA72YJ09' > 
  5. Transcript 'KH2012:KH.C4.420.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.420.v1.A.nonSL6-1

Possible name(s)

LSM7; LSM8; SNRPG

Gene model

KH2012:KH.C4.420

Location

KhC4 [1,755,563 / 1,756,236]

Sequences

Amino acid sequence

Length: 80

>KH.C4.420.v1.A.nonSL6-1
RLIEMSKAHPPELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGIGKRKDGSVEK
IGMVVVRGNSVLMMEAVDRI

Nucleotide sequence

Length: 673

>KH2012:KH.C4.420.v1.A.nonSL6-1
CAGACTAATCGAAATGAGCAAGGCGCACCCTCCTGAGCTTAAAAAGTTTATGGACAAGAA
GTTGGATTTAAAATTAAATGGCGGACGAAGCATTCAGGGAATTCTACGAGGATTTGATCC
GTTCATGAACTTAGTTATTGACGATGGTATAGGCAAAAGAAAGGACGGTTCAGTTGAAAA
GATCGGTATGGTTGTCGTGCGCGGAAACTCTGTATTAATGATGGAGGCTGTGGACCGGAT
ATAGTCGAATAATCAAAGGCTTATCCGTGGTAAACAATCATTAAGAGTTCTGTTATTCAA
ACATAAGAATTCAATTAATATAGAAAGCGACATTATTATTCATCGTAGTGTCAACATTTT
GGAACTTCTTTGTTATGTTCAATATACATTTTCTAATTTGATTTCAATTCACTACTCCCA
ATTAAATCATACATGTTTTTGTTGAATGTGTCTCTGTTTTCTATGGTCACTTTATTATCA
TTGACAAATACAACTTTTATATTTGACCTACCTGTCTCGCTGTCTGAATGTTGTGTTTTG
CCGTTGTGTCTTACATGTTAAGCTGGAAGTAACAAATTTAACTCAAAATTGAAGAATGGC
CAAAAGTAACTACAGATCTTAGGTTTTTTTTTGAATGTCTTTTCGAGAAAATTAGTCACT
TTAATTTAATTAG

InterProScan

CDD
Sm_G (IPR034098) - T[9-78] 3.69498E-37
SMART
LSM_dom_euk/arc (IPR001163) - T[11-76] 3.9E-20
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[11-78] 7.36E-18
Pfam
LSM_dom_euk/arc (IPR001163) - T[12-75] 2.7E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUXG_HUMAN 71.053 % 117 1.23E-36
RUXGL_HUMAN 67.105 % 112 1.7E-34