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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  2. Transcript 'KH2012:KH.C4.713.v1....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'KH2012:KH.C9.494.v4....' > 
  5. Transcript 'KH2012:KH.C4.420.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.420.v1.A.nonSL32-1

Possible name(s)

LSM7; LSM8; SNRPG

Gene model

KH2012:KH.C4.420

Location

KhC4 [1,755,563 / 1,756,247]

Sequences

Amino acid sequence

Length: 84

>KH.C4.420.v1.A.nonSL32-1
NFVSRLIEMSKAHPPELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGIGKRKDG
SVEKIGMVVVRGNSVLMMEAVDRI

Nucleotide sequence

Length: 684

>KH2012:KH.C4.420.v1.A.nonSL32-1
AACTTTGTATCCAGACTAATCGAAATGAGCAAGGCGCACCCTCCTGAGCTTAAAAAGTTT
ATGGACAAGAAGTTGGATTTAAAATTAAATGGCGGACGAAGCATTCAGGGAATTCTACGA
GGATTTGATCCGTTCATGAACTTAGTTATTGACGATGGTATAGGCAAAAGAAAGGACGGT
TCAGTTGAAAAGATCGGTATGGTTGTCGTGCGCGGAAACTCTGTATTAATGATGGAGGCT
GTGGACCGGATATAGTCGAATAATCAAAGGCTTATCCGTGGTAAACAATCATTAAGAGTT
CTGTTATTCAAACATAAGAATTCAATTAATATAGAAAGCGACATTATTATTCATCGTAGT
GTCAACATTTTGGAACTTCTTTGTTATGTTCAATATACATTTTCTAATTTGATTTCAATT
CACTACTCCCAATTAAATCATACATGTTTTTGTTGAATGTGTCTCTGTTTTCTATGGTCA
CTTTATTATCATTGACAAATACAACTTTTATATTTGACCTACCTGTCTCGCTGTCTGAAT
GTTGTGTTTTGCCGTTGTGTCTTACATGTTAAGCTGGAAGTAACAAATTTAACTCAAAAT
TGAAGAATGGCCAAAAGTAACTACAGATCTTAGGTTTTTTTTTGAATGTCTTTTCGAGAA
AATTAGTCACTTTAATTTAATTAG

InterProScan

CDD
Sm_G (IPR034098) - T[13-82] 3.34288E-37
SMART
LSM_dom_euk/arc (IPR001163) - T[15-80] 3.9E-20
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[15-82] 8.8E-18
Pfam
LSM_dom_euk/arc (IPR001163) - T[16-79] 3.2E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUXG_HUMAN 71.053 % 117 1.67E-36
RUXGL_HUMAN 67.105 % 112 2.33E-34