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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...' > 
  2. Transcript 'Cisavi.CG.ENS81.R19....' > 
  3. Transcript 'KH2012:KH.C4.420.v1....' > 
  4. Transcript 'Cisavi.CG.ENS81.R19....' > 
  5. Transcript 'KH2012:KH.C4.420.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.420.v1.A.nonSL31-1

Possible name(s)

LSM7; LSM8; SNRPG

Gene model

KH2012:KH.C4.420

Location

KhC4 [1,755,563 / 1,756,260]

Sequences

Amino acid sequence

Length: 88

>KH.C4.420.v1.A.nonSL31-1
FVIYNFVSRLIEMSKAHPPELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGIGK
RKDGSVEKIGMVVVRGNSVLMMEAVDRI

Nucleotide sequence

Length: 697

>KH2012:KH.C4.420.v1.A.nonSL31-1
GTTTGTGATCTACAACTTTGTATCCAGACTAATCGAAATGAGCAAGGCGCACCCTCCTGA
GCTTAAAAAGTTTATGGACAAGAAGTTGGATTTAAAATTAAATGGCGGACGAAGCATTCA
GGGAATTCTACGAGGATTTGATCCGTTCATGAACTTAGTTATTGACGATGGTATAGGCAA
AAGAAAGGACGGTTCAGTTGAAAAGATCGGTATGGTTGTCGTGCGCGGAAACTCTGTATT
AATGATGGAGGCTGTGGACCGGATATAGTCGAATAATCAAAGGCTTATCCGTGGTAAACA
ATCATTAAGAGTTCTGTTATTCAAACATAAGAATTCAATTAATATAGAAAGCGACATTAT
TATTCATCGTAGTGTCAACATTTTGGAACTTCTTTGTTATGTTCAATATACATTTTCTAA
TTTGATTTCAATTCACTACTCCCAATTAAATCATACATGTTTTTGTTGAATGTGTCTCTG
TTTTCTATGGTCACTTTATTATCATTGACAAATACAACTTTTATATTTGACCTACCTGTC
TCGCTGTCTGAATGTTGTGTTTTGCCGTTGTGTCTTACATGTTAAGCTGGAAGTAACAAA
TTTAACTCAAAATTGAAGAATGGCCAAAAGTAACTACAGATCTTAGGTTTTTTTTTGAAT
GTCTTTTCGAGAAAATTAGTCACTTTAATTTAATTAG

InterProScan

CDD
Sm_G (IPR034098) - T[17-86] 2.56215E-37
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[19-86] 1.02E-17
SMART
LSM_dom_euk/arc (IPR001163) - T[19-84] 3.9E-20
Pfam
LSM_dom_euk/arc (IPR001163) - T[20-83] 3.7E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUXG_HUMAN 71.053 % 117 1.61E-36
RUXGL_HUMAN 67.105 % 112 2.39E-34