- Clone 'cien38385' >
- Transcript 'KH2012:KH.C4.250.v2....'
Transcript Model
Transcript Id
KH2012:KH.C4.250.v2.A.SL2-1
Possible name(s)
DDX24; DDX47
Gene model
Location
KhC4 [3,272,636 / 3,280,092]
Amino acid sequence
Length: 735
>KH.C4.250.v2.A.SL2-1
IMSSTTAVHALTERKPWKAIPVKVGKSAPKFNDLIEFEELSEYDLVGAFDNEPIKPITNL
PKKKKNLRKQERLNKLKSLKEPEKVVVDKTTTELPENTTDQNNKDVIEKITTVNNNENNV
KAKKRKNKTKPNKKSKKAKLNSGTQIEETNEEENEDILSTVDMSAWQNLYVPETVLKALA
ELRFTKPMPIQEQCIPVAIRDKRDILGAAETGSGKTLAFGIPLLHHLMEDRERNLLENTE
NAEIDEVDLCFSAYCWFSLFYDDEHMSDFEDAEPVSKEEIEETQPTKALPALVLTPTREL
AIQVKKHLTQVAKHTKLWSTVVVGGMAQQKQIRLLNKEPDIVIATPGRLWELLESGHPYL
STIHKLRYLVIDEADRMLEHGHFEELNKLLEVINLKKSKTKRQTFIFSATLTTVHFTPNR
PNFPTQASSNTKDTKLSKLMKKIGVRNKPFVADLTTKKLTAEKLSEAKIICQPKEKDFYL
YYFIKSHPGRTLIFTNSIDCIFHLSGVLDALGCNPLHIHAKMQQRQRLKHLDRFQENPNA
IMIASDVAARGLDIPGVKYVIHYQVPRTMETYIHRSGRSARSGEDGLSLLFVSSDEMSFY
KRICRSLDKEDGLPLFLINDSYMAAIRKMVTLAREVDSLSHREKKVRLHNDWFSKAAAAM
DMDIDDDMLLSTDNRSDKTQLLKSKRQQLSALLKRPIFPKGFSGKFITKSGELRLPGILN
GKSQNVFGKSMTGKK
Nucleotide sequence
Length: 2,470
>KH2012:KH.C4.250.v2.A.SL2-1
ATTTGTAAACGCTATGCAAACTATATGAATATAAATAATGTCATCTACCACTGCTGTACA
CGCACTAACAGAGAGGAAACCATGGAAGGCAATCCCTGTCAAGGTTGGAAAGTCAGCTCC
TAAGTTTAACGACCTTATCGAGTTTGAAGAATTATCAGAATATGATTTGGTTGGAGCTTT
TGACAATGAACCAATAAAACCAATCACAAATTTACCCAAGAAAAAAAAGAATTTAAGAAA
ACAGGAAAGATTAAACAAACTCAAATCATTAAAAGAACCTGAAAAGGTAGTTGTTGATAA
AACAACAACCGAACTGCCTGAAAACACTACAGATCAAAATAATAAAGATGTTATTGAAAA
AATTACAACTGTAAACAATAACGAAAACAATGTAAAAGCGAAAAAGAGGAAAAACAAAAC
TAAACCGAACAAAAAATCCAAAAAAGCAAAATTAAATTCTGGAACTCAAATAGAAGAAAC
CAATGAAGAAGAAAATGAAGACATTTTATCCACAGTTGACATGAGTGCTTGGCAAAATCT
TTATGTTCCAGAAACTGTTTTAAAGGCATTAGCAGAGCTTAGGTTTACAAAACCTATGCC
AATACAAGAACAGTGTATACCTGTTGCCATCCGTGACAAACGAGACATCTTAGGAGCTGC
AGAGACAGGAAGTGGGAAGACGTTGGCATTCGGGATTCCTCTCCTGCATCACTTGATGGA
AGATAGGGAGAGAAATTTATTGGAAAACACGGAAAATGCGGAAATTGATGAGGTAGATTT
GTGTTTTTCTGCATATTGTTGGTTTTCTTTGTTTTATGATGATGAACACATGAGTGACTT
TGAAGACGCTGAACCAGTTTCAAAAGAAGAAATTGAAGAAACGCAACCGACCAAAGCATT
ACCAGCACTTGTGTTAACACCAACGAGAGAATTAGCCATACAGGTAAAGAAGCACTTGAC
ACAAGTTGCCAAACACACTAAACTATGGTCAACTGTGGTGGTTGGTGGAATGGCTCAACA
AAAACAAATCCGGTTGTTAAACAAGGAACCAGATATTGTCATTGCAACTCCTGGAAGGTT
GTGGGAATTGTTAGAATCGGGTCACCCATACTTATCCACCATCCACAAACTTCGATATCT
TGTGATCGATGAAGCGGATCGTATGCTCGAACACGGACATTTTGAAGAACTCAACAAACT
ACTTGAAGTTATTAATCTAAAAAAATCTAAAACGAAACGTCAAACCTTCATATTCTCTGC
CACTCTTACCACTGTACATTTTACTCCAAACCGACCAAACTTTCCAACTCAAGCATCATC
TAACACCAAGGATACCAAACTATCAAAGCTAATGAAGAAGATAGGGGTTCGGAACAAACC
GTTTGTTGCGGACTTGACTACTAAAAAACTTACAGCTGAGAAATTATCTGAAGCAAAAAT
AATTTGCCAACCAAAAGAAAAGGATTTTTATCTTTACTATTTCATTAAATCACATCCTGG
TCGTACTTTGATCTTCACGAACAGCATCGATTGCATCTTCCACCTCTCGGGAGTCCTTGA
TGCTCTCGGATGCAATCCTCTTCACATCCACGCAAAGATGCAACAGCGACAAAGATTAAA
ACATCTCGATCGTTTCCAGGAAAATCCGAATGCGATCATGATCGCAAGTGATGTGGCTGC
AAGAGGACTTGACATACCTGGTGTAAAATATGTGATTCACTACCAAGTACCTCGTACCAT
GGAAACTTATATACATAGAAGTGGAAGGTCAGCCAGATCTGGTGAGGATGGTTTAAGTTT
GCTTTTCGTTAGTTCGGATGAAATGAGCTTCTACAAACGCATCTGTAGATCCCTGGATAA
AGAGGATGGTCTCCCTCTCTTCCTCATCAATGATAGTTACATGGCTGCTATAAGGAAGAT
GGTGACCTTGGCAAGGGAAGTGGATTCGCTTTCACATAGGGAGAAAAAGGTTCGTTTGCA
TAACGACTGGTTCAGCAAAGCTGCCGCAGCCATGGATATGGATATAGATGACGACATGCT
GCTTTCAACGGATAACAGGAGTGACAAAACCCAGCTGTTGAAATCGAAAAGGCAACAGCT
TAGCGCTTTGCTGAAACGACCGATTTTTCCCAAAGGTTTTTCAGGAAAATTCATCACGAA
AAGCGGGGAGCTGCGGTTGCCAGGGATTCTTAATGGGAAATCCCAGAACGTGTTTGGAAA
ATCGATGACTGGGAAAAAATAAACGAAATTTTCTTTTCGTACATATCTTGTCGTATAGCC
ACTCGTCGTCTGCTGCTATTTTAGCAAGAATCTTGACAAAAAAGCCTTTGTTTTAACTCA
AGGTTTTGATAAGCTGTTTTGGCGGTTGTGTTAAATAGAGAAGAGATTTTTGGTGCTTTT
GAGGATCGACGAATTTAGGCGTCTCGTCCACTTGCAAATTAAGGAACTCGAATAAACAAA
CCGTTTTTGA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[164-192] 9.913 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[181-230] 1.59E-5 - T[289-411] 3.65E-60 - T[462-603] 3.65E-60 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[183-437] 4.9E-43 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[189-412] 1.4E-41 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[196-429] 25.178 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[370-378] . |
| CDD |
Helicase_C (IPR001650) - T[473-591] 1.57489E-28 |
| Pfam |
Helicase_C (IPR001650) - T[476-583] 8.3E-25 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[476-630] 18.436 |
| SMART |
Helicase_C (IPR001650) - T[502-583] 6.0E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX47_HUMAN | 34.332 % | 191 | 1.43E-53 |
| DDX49_HUMAN | 30.522 % | 195 | 7.92E-55 |
| DDX24_HUMAN | 46.868 % | 421 | 8.32E-136 |
