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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L71.2.v2.A...'
  2. Clone 'ciad011g11'
  3. Transcript 'KH2012:KH.C4.19.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C4.19.v1.A.nonSL5-1

Possible name(s)

TRMT12; TRMT5

Location

KhC4 [2,606,073 / 2,611,305]

Sequences

Amino acid sequence

Length: 463

>KH.C4.19.v1.A.nonSL5-1
SQCKRVVMVIAYIRNLIRKVIQRGMDHEHSALYPPAAVRGMKVLDRSAFEQEVTLPALLV
PVQSLRNCRKMMKSKLVNLSINKKVVDPPAHLVGEELTAGHKLFLLKPGTTMETYSSDEK
QMLGKLGVKDKIYDYRITLGYENYKHWDVLRAILPDSEMAARGFSQVGHILHVNLRDHQL
PYKHIIGQVLLDKIQTARTVVNKHQNIDNKFRNFEMEVIAGENNFVTRIIEHGRKFEFDF
SKVFWNSRLSTEHQRITNFVSESDVVFDVFAGVGPFAIPIAKKGCVVYANDLNPESYRWL
LHNVALNKTKAKCFNSDGREFIQTELRNYLLTRSPHKVHVLMNLPAIAVEFLDVFRGLLC
NGDCLAANDLSNASHKKLLSIPEVCVHLYIFAPEKDGIADLKSRIKQSLGCALPEDAVIY
NVRNVAPKKQMYCVSFVLSQHWMDQKEQDVYEPAPKKIKECIS

Nucleotide sequence

Length: 1,611

>KH2012:KH.C4.19.v1.A.nonSL5-1
GATTCCAAATTTTACTTACAGGCTAGTTTTTGTTAATTGTTGTGCTATATTTTCTACAAA
AGACTGCTGAAGAATGAACGCTGTATCACATGTGGCTAAAATGTATTCACACCCCAACTG
ATAGTCTCAATGTAAACGTGTTGTGATGGTCATTGCCTACATTAGAAATTTAATACGTAA
AGTCATACAAAGAGGAATGGATCACGAACATAGCGCTCTGTACCCGCCTGCTGCAGTGCG
TGGCATGAAAGTGTTGGATAGGAGCGCATTTGAACAAGAAGTCACCCTTCCAGCATTACT
TGTGCCTGTACAATCTCTAAGGAACTGCCGTAAAATGATGAAAAGCAAACTTGTTAATTT
AAGTATCAACAAAAAAGTGGTTGACCCCCCTGCACACCTGGTGGGTGAAGAACTAACTGC
TGGCCACAAACTATTTCTGTTGAAACCAGGCACCACAATGGAGACTTATTCATCGGACGA
AAAACAAATGTTAGGCAAACTTGGAGTAAAAGATAAAATATATGACTACAGGATAACATT
GGGTTATGAAAACTATAAGCACTGGGACGTACTGCGAGCCATTCTACCTGACAGTGAAAT
GGCAGCAAGAGGATTTTCTCAAGTTGGTCACATTCTGCATGTAAATCTAAGGGATCATCA
GTTACCTTACAAACACATAATTGGCCAGGTTCTTCTGGACAAGATACAGACAGCGCGCAC
TGTGGTAAACAAGCACCAAAATATTGATAACAAGTTTCGAAATTTTGAAATGGAGGTGAT
AGCTGGGGAAAACAATTTTGTTACAAGGATTATAGAACATGGAAGGAAATTCGAATTTGA
TTTTTCTAAGGTGTTTTGGAATTCACGTTTATCTACAGAACACCAGCGTATAACCAATTT
TGTGTCTGAAAGTGATGTTGTATTTGACGTTTTTGCTGGAGTTGGACCTTTTGCCATTCC
AATCGCTAAGAAGGGTTGTGTAGTTTACGCAAATGATTTGAATCCTGAGTCATATAGATG
GTTGCTCCACAATGTTGCATTGAACAAAACCAAAGCCAAATGTTTTAACTCTGACGGAAG
GGAATTTATACAAACTGAATTGCGAAATTATCTTCTTACTAGAAGTCCACACAAAGTTCA
TGTTTTAATGAACCTGCCTGCCATTGCTGTAGAATTTCTTGATGTTTTTCGTGGCTTGCT
TTGCAATGGTGATTGCCTTGCTGCTAATGATCTGTCCAATGCTTCACACAAGAAACTGCT
TTCTATTCCAGAAGTATGTGTTCATTTGTACATATTCGCGCCAGAAAAAGATGGAATAGC
TGACTTAAAATCAAGAATTAAGCAAAGTCTTGGCTGTGCACTGCCAGAGGACGCTGTTAT
ATATAATGTTCGAAATGTTGCCCCAAAGAAACAAATGTACTGTGTCAGTTTTGTATTAAG
TCAGCATTGGATGGACCAGAAAGAGCAAGATGTATATGAACCTGCACCAAAAAAAATAAA
AGAATGCATTAGCTGATGTTAAAACTTGTGCTTTGCAATTGGTCTATTGCAGAATTGTTT
AGTTTCTTTGCAATAAATATTTTACAATCATCTAGTGTGTGATTTTGCCAG

InterProScan

Hamap
tRNA_Gua_MeTrfase_euk (IPR025792) - T[41-456] 24.916
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[162-439] 6.48E-55
Pfam
MeTrfase_TRM5/TYW2 (IPR030382) - T[163-355] 2.2E-61
ProSiteProfiles
MeTrfase_TRM5/TYW2 (IPR030382) - T[164-440] 96.843

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRM5_HUMAN 43.75 % 337 4.37E-111