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  1. Transcript 'KH2012:KH.C4.19.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C4.19.v1.A.nonSL2-1

Possible name(s)

TRMT12; TRMT5

Location

KhC4 [2,606,073 / 2,611,301]

Sequences

Amino acid sequence

Length: 463

>KH.C4.19.v1.A.nonSL2-1
SQCKRVVMVIAYIRNLIRKVIQRGMDHEHSALYPPAAVRGMKVLDRSAFEQEVTLPALLV
PVQSLRNCRKMMKSKLVNLSINKKVVDPPAHLVGEELTAGHKLFLLKPGTTMETYSSDEK
QMLGKLGVKDKIYDYRITLGYENYKHWDVLRAILPDSEMAARGFSQVGHILHVNLRDHQL
PYKHIIGQVLLDKIQTARTVVNKHQNIDNKFRNFEMEVIAGENNFVTRIIEHGRKFEFDF
SKVFWNSRLSTEHQRITNFVSESDVVFDVFAGVGPFAIPIAKKGCVVYANDLNPESYRWL
LHNVALNKTKAKCFNSDGREFIQTELRNYLLTRSPHKVHVLMNLPAIAVEFLDVFRGLLC
NGDCLAANDLSNASHKKLLSIPEVCVHLYIFAPEKDGIADLKSRIKQSLGCALPEDAVIY
NVRNVAPKKQMYCVSFVLSQHWMDQKEQDVYEPAPKKIKECIS

Nucleotide sequence

Length: 1,607

>KH2012:KH.C4.19.v1.A.nonSL2-1
CCAAATTTTACTTACAGGCTAGTTTTTGTTAATTGTTGTGCTATATTTTCTACAAAAGAC
TGCTGAAGAATGAACGCTGTATCACATGTGGCTAAAATGTATTCACACCCCAACTGATAG
TCTCAATGTAAACGTGTTGTGATGGTCATTGCCTACATTAGAAATTTAATACGTAAAGTC
ATACAAAGAGGAATGGATCACGAACATAGCGCTCTGTACCCGCCTGCTGCAGTGCGTGGC
ATGAAAGTGTTGGATAGGAGCGCATTTGAACAAGAAGTCACCCTTCCAGCATTACTTGTG
CCTGTACAATCTCTAAGGAACTGCCGTAAAATGATGAAAAGCAAACTTGTTAATTTAAGT
ATCAACAAAAAAGTGGTTGACCCCCCTGCACACCTGGTGGGTGAAGAACTAACTGCTGGC
CACAAACTATTTCTGTTGAAACCAGGCACCACAATGGAGACTTATTCATCGGACGAAAAA
CAAATGTTAGGCAAACTTGGAGTAAAAGATAAAATATATGACTACAGGATAACATTGGGT
TATGAAAACTATAAGCACTGGGACGTACTGCGAGCCATTCTACCTGACAGTGAAATGGCA
GCAAGAGGATTTTCTCAAGTTGGTCACATTCTGCATGTAAATCTAAGGGATCATCAGTTA
CCTTACAAACACATAATTGGCCAGGTTCTTCTGGACAAGATACAGACAGCGCGCACTGTG
GTAAACAAGCACCAAAATATTGATAACAAGTTTCGAAATTTTGAAATGGAGGTGATAGCT
GGGGAAAACAATTTTGTTACAAGGATTATAGAACATGGAAGGAAATTCGAATTTGATTTT
TCTAAGGTGTTTTGGAATTCACGTTTATCTACAGAACACCAGCGTATAACCAATTTTGTG
TCTGAAAGTGATGTTGTATTTGACGTTTTTGCTGGAGTTGGACCTTTTGCCATTCCAATC
GCTAAGAAGGGTTGTGTAGTTTACGCAAATGATTTGAATCCTGAGTCATATAGATGGTTG
CTCCACAATGTTGCATTGAACAAAACCAAAGCCAAATGTTTTAACTCTGACGGAAGGGAA
TTTATACAAACTGAATTGCGAAATTATCTTCTTACTAGAAGTCCACACAAAGTTCATGTT
TTAATGAACCTGCCTGCCATTGCTGTAGAATTTCTTGATGTTTTTCGTGGCTTGCTTTGC
AATGGTGATTGCCTTGCTGCTAATGATCTGTCCAATGCTTCACACAAGAAACTGCTTTCT
ATTCCAGAAGTATGTGTTCATTTGTACATATTCGCGCCAGAAAAAGATGGAATAGCTGAC
TTAAAATCAAGAATTAAGCAAAGTCTTGGCTGTGCACTGCCAGAGGACGCTGTTATATAT
AATGTTCGAAATGTTGCCCCAAAGAAACAAATGTACTGTGTCAGTTTTGTATTAAGTCAG
CATTGGATGGACCAGAAAGAGCAAGATGTATATGAACCTGCACCAAAAAAAATAAAAGAA
TGCATTAGCTGATGTTAAAACTTGTGCTTTGCAATTGGTCTATTGCAGAATTGTTTAGTT
TCTTTGCAATAAATATTTTACAATCATCTAGTGTGTGATTTTGCCAG

InterProScan

Hamap
tRNA_Gua_MeTrfase_euk (IPR025792) - T[41-456] 24.916
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[162-439] 6.48E-55
Pfam
MeTrfase_TRM5/TYW2 (IPR030382) - T[163-355] 2.2E-61
ProSiteProfiles
MeTrfase_TRM5/TYW2 (IPR030382) - T[164-440] 96.843

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRM5_HUMAN 43.75 % 337 4.37E-111