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TRANSCRIPT CARD

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  1. Clone 'cilv020e16' > 
  2. Clone 'cijv017n13' > 
  3. EST 'FF732279.1' > 
  4. Clone 'cilv002k21' > 
  5. Transcript 'KH2012:KH.C4.173.v3....'

Transcript Model

Transcript Id

KH2012:KH.C4.173.v3.R.ND2-1

Possible name(s)

VANGL1; VANGL2

Gene model

KH2012:KH.C4.173

Location

KhC4 [3,195,659 / 3,203,201]

Sequences

Amino acid sequence

Length: 527

>KH.C4.173.v3.R.ND2-1
SERSRHGHKRHRSHERGSRRHRNRGSGNELDDDYEGEKTVTIRTPPMDGRHDSRATEGTI
SVNIPEDDNWGETNTFISGTTDVTQLSHESLAKLTKDIEASIGFRDCGYVGTIIFALISY
LSPIAFVVMPKFLWDNSSPLSACGTSCKGTLISMSFKLLILLVASWAIFFRRQRTSMPKV
FMFRSLIMVFVLLITLTYWLFYGIWILEQKEKDFQSIIEFSDSMTNCLLFVHYLSLVLLE
LRHLQTTFVLEVIRTTDGERRFYNIGDLSIQRCSVWVLEKYYCDFPVYNPALMRIPSRSA
RMKHINNTFKVYDVDGKPGNDTQGQNRAILAAVARRRDAGHNERYYEEAEYERRVRKRRA
RLVAATEDAFTHIRKASEHEINTKGKSSNSVMECDAASEAIFPALARSLQKYLRTTRQHQ
HYQVEDIHKHLAFCIKNEMTPKAFLQRYINPGSYLTYDPRHDSSQWDLVSDEPLVNMLKD
GTVFRLNQPEYSLVVTVRKSPRIGLQEVFIDPDSYRYVMHMQSETSV

Nucleotide sequence

Length: 2,200

>KH2012:KH.C4.173.v3.R.ND2-1
ATCGGAGCGGTCACGACATGGTCACAAGCGACACAGGTCACATGAGCGGGGAAGTCGTCG
CCATAGAAACCGAGGTAGTGGAAACGAGCTTGATGATGATTATGAAGGTGAGAAAACAGT
CACAATTAGAACCCCACCTATGGATGGGAGACACGACAGCAGAGCAACTGAAGGAACCAT
CTCTGTTAACATACCTGAGGATGATAACTGGGGCGAGACCAACACCTTTATATCAGGAAC
CACAGACGTCACGCAACTCAGTCATGAATCGCTTGCAAAACTGACCAAGGATATTGAAGC
TTCAATTGGTTTTCGAGACTGTGGTTATGTTGGGACCATTATATTTGCCCTTATTTCCTA
CCTTTCCCCGATAGCATTTGTGGTGATGCCGAAATTTTTGTGGGACAACTCATCTCCTCT
TTCAGCGTGCGGCACCTCATGTAAAGGTACCCTCATCAGTATGTCATTCAAACTCCTCAT
ACTCCTTGTAGCATCATGGGCAATATTTTTCCGACGCCAGAGAACCAGCATGCCAAAAGT
GTTTATGTTCAGGTCTCTGATCATGGTATTTGTTCTTCTAATCACACTCACGTACTGGCT
GTTTTATGGCATCTGGATTTTGGAGCAAAAGGAAAAAGACTTTCAGTCGATAATCGAGTT
CTCAGACAGCATGACGAACTGCCTCTTATTCGTGCATTATCTCTCGCTTGTTTTACTCGA
ACTACGTCACTTACAAACCACCTTCGTGCTCGAAGTTATTCGAACCACCGATGGCGAACG
ACGGTTCTACAACATTGGAGACTTGAGCATCCAGCGTTGTTCAGTGTGGGTGTTGGAGAA
ATATTATTGCGACTTTCCCGTGTATAATCCAGCCCTGATGCGTATACCTTCTCGTAGCGC
ACGTATGAAGCATATCAACAATACATTTAAAGTGTATGACGTCGATGGCAAACCGGGCAA
TGACACACAAGGACAAAATCGTGCGATTCTTGCAGCGGTTGCTAGGCGACGAGATGCAGG
ACATAATGAAAGATATTATGAGGAAGCAGAATATGAGAGAAGAGTAAGGAAGAGACGAGC
AAGGTTGGTCGCCGCCACCGAAGACGCTTTCACTCACATTCGAAAAGCAAGCGAGCATGA
AATTAACACGAAGGGCAAGTCGTCCAACTCTGTCATGGAGTGCGACGCCGCCTCTGAGGC
CATATTCCCCGCGTTGGCTAGATCGTTGCAGAAGTACCTTCGCACCACACGTCAACACCA
ACATTACCAGGTAGAAGATATCCATAAACATCTTGCTTTCTGTATCAAGAACGAAATGAC
TCCAAAAGCTTTCCTACAAAGATACATCAATCCCGGCTCTTACTTGACCTATGATCCACG
TCACGACTCTAGTCAATGGGACTTAGTAAGCGACGAACCTCTTGTTAATATGCTTAAGGA
CGGCACAGTGTTTCGACTTAACCAGCCCGAGTATTCCCTCGTCGTTACCGTGCGCAAATC
TCCACGAATTGGTTTGCAGGAGGTTTTCATTGATCCCGATTCTTACCGTTATGTAATGCA
CATGCAGAGCGAGACGTCGGTGTGACGTCATCATTTCATGACGTCATCCGACCGTAAGAT
CGCCTGCTTCGCTCCGCCACGATCGGTACACCCCCGACACAAAGTGTAATATATTTAACG
TGAGCGATAGCAGGGCCCAGCTACCCGAGTGTCGAGTACTCGGTTCCCACTATAGTGTGG
CGTCTACGAAGCCCACTTTTATTGGATCCGCATTGAGGCAAAGCCAAATTTACCAAATTC
GTTACTCCTATCAACCAAGTGCCAGCTCTTTTGTTTTTTAAAAGTTCTTTCTCATCCCGG
TCGTATATTACGACCATTTTATCTGCTACGGAACGCATGATGCTGCAGAAGGATTGTGTC
CAAGTCAAAACGTGAGGAGAGTGCAATCTGCCTAATCATAACGGACCAAAGCGACGATGC
CTTCTGCAATTTCCATAGTTTTTCTATCACTGGTACCCTGCGTTCTGGAATGGAATGTTT
TCTTAGATCATTTATTATCAAACTTCGAGAATTTTCTTCGCAGAAGTCACCAAGGCAACC
GCATAGTCGTGTTGCCACACTGTCTAACATGTTTAAGAAAATAACGATCGTTTAAATAAA
ATCTGCTGTATTTGCGCGTACTTCACGAACGTGTCAGCTA

InterProScan

PIRSF
VANGL (IPR009539) - T[1-527] 8.9E-184
PANTHER
VANGL (IPR009539) - T[2-527] 4.7E-207
Pfam
VANGL (IPR009539) - T[18-527] 8.1E-216

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VANG1_HUMAN 49.615 % 476 2.85E-164
VANG2_HUMAN 49.802 % 388 6.66E-130