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TRANSCRIPT CARD

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  1. Clone 'cien208994' > 
  2. Transcript 'KH2012:KH.S643.6.v1....' > 
  3. Transcript 'KH2012:KH.C2.14.v1.A...' > 
  4. Transcript 'KH2012:KH.C1.570.v1....' > 
  5. Transcript 'KH2012:KH.C4.173.v2....'

Transcript Model

Transcript Id

KH2012:KH.C4.173.v2.A.SL3-1

Possible name(s)

VANGL1; VANGL2

Gene model

KH2012:KH.C4.173

Location

KhC4 [3,195,659 / 3,203,766]

Sequences

Amino acid sequence

Length: 550

>KH.C4.173.v2.A.SL3-1
LKIHMDTDKLQDNDSEYSLATNRSERSRHGHKRHRSHERGSRRHRNRGSGNELDDDYEGE
KTVTIRTPPMDGRHDSRATEGTISVNIPEDDNWGETNTFISGTTDVTQLSHESLAKLTKD
IEASIGFRDCGYVGTIIFALISYLSPIAFVVMPKFLWDNSSPLSACGTSCKGTLISMSFK
LLILLVASWAIFFRRQRTSMPKVFMFRSLIMVFVLLITLTYWLFYGIWILEQKEKDFQSI
IEFSDSMTNCLLFVHYLSLVLLELRHLQTTFVLEVIRTTDGERRFYNIGDLSIQRCSVWV
LEKYYCDFPVYNPALMRIPSRSARMKHINNTFKVYDVDGKPGNDTQGQNRAILAAVARRR
DAGHNERYYEEAEYERRVRKRRARLVAATEDAFTHIRKASEHEINTKGKSSNSVMECDAA
SEAIFPALARSLQKYLRTTRQHQHYQVEDIHKHLAFCIKNEMTPKAFLQRYINPGSYLTY
DPRHDSSQWDLVSDEPLVNMLKDGTVFRLNQPEYSLVVTVRKSPRIGLQEVFIDPDSYRY
VMHMQSETSV

Nucleotide sequence

Length: 2,337

>KH2012:KH.C4.173.v2.A.SL3-1
GTTGACTGTATTTTTCCTGATTTTAACCACTGGGAAATAGTTTGGATTGGTATAAACAAT
TGGAAGTAGCTGAAAATACACATGGACACGGACAAATTACAAGACAATGATTCAGAGTAT
TCTCTGGCAACAAACAGATCGGAGCGGTCACGACATGGTCACAAGCGACACAGGTCACAT
GAGCGGGGAAGTCGTCGCCATAGAAACCGAGGTAGTGGAAACGAGCTTGATGATGATTAT
GAAGGTGAGAAAACAGTCACAATTAGAACCCCACCTATGGATGGGAGACACGACAGCAGA
GCAACTGAAGGAACCATCTCTGTTAACATACCTGAGGATGATAACTGGGGCGAGACCAAC
ACCTTTATATCAGGAACCACAGACGTCACGCAACTCAGTCATGAATCGCTTGCAAAACTG
ACCAAGGATATTGAAGCTTCAATTGGTTTTCGAGACTGTGGTTATGTTGGGACCATTATA
TTTGCCCTTATTTCCTACCTTTCCCCGATAGCATTTGTGGTGATGCCGAAATTTTTGTGG
GACAACTCATCTCCTCTTTCAGCGTGCGGCACCTCATGTAAAGGTACCCTCATCAGTATG
TCATTCAAACTCCTCATACTCCTTGTAGCATCATGGGCAATATTTTTCCGACGCCAGAGA
ACCAGCATGCCAAAAGTGTTTATGTTCAGGTCTCTGATCATGGTATTTGTTCTTCTAATC
ACACTCACGTACTGGCTGTTTTATGGCATCTGGATTTTGGAGCAAAAGGAAAAAGACTTT
CAGTCGATAATCGAGTTCTCAGACAGCATGACGAACTGCCTCTTATTCGTGCATTATCTC
TCGCTTGTTTTACTCGAACTACGTCACTTACAAACCACCTTCGTGCTCGAAGTTATTCGA
ACCACCGATGGCGAACGACGGTTCTACAACATTGGAGACTTGAGCATCCAGCGTTGTTCA
GTGTGGGTGTTGGAGAAATATTATTGCGACTTTCCCGTGTATAATCCAGCCCTGATGCGT
ATACCTTCTCGTAGCGCACGTATGAAGCATATCAACAATACATTTAAAGTGTATGACGTC
GATGGCAAACCGGGCAATGACACACAAGGACAAAATCGTGCGATTCTTGCAGCGGTTGCT
AGGCGACGAGATGCAGGACATAATGAAAGATATTATGAGGAAGCAGAATATGAGAGAAGA
GTAAGGAAGAGACGAGCAAGGTTGGTCGCCGCCACCGAAGACGCTTTCACTCACATTCGA
AAAGCAAGCGAGCATGAAATTAACACGAAGGGCAAGTCGTCCAACTCTGTCATGGAGTGC
GACGCCGCCTCTGAGGCCATATTCCCCGCGTTGGCTAGATCGTTGCAGAAGTACCTTCGC
ACCACACGTCAACACCAACATTACCAGGTAGAAGATATCCATAAACATCTTGCTTTCTGT
ATCAAGAACGAAATGACTCCAAAAGCTTTCCTACAAAGATACATCAATCCCGGCTCTTAC
TTGACCTATGATCCACGTCACGACTCTAGTCAATGGGACTTAGTAAGCGACGAACCTCTT
GTTAATATGCTTAAGGACGGCACAGTGTTTCGACTTAACCAGCCCGAGTATTCCCTCGTC
GTTACCGTGCGCAAATCTCCACGAATTGGTTTGCAGGAGGTTTTCATTGATCCCGATTCT
TACCGTTATGTAATGCACATGCAGAGCGAGACGTCGGTGTGACGTCATCATTTCATGACG
TCATCCGACCGTAAGATCGCCTGCTTCGCTCCGCCACGATCGGTACACCCCCGACACAAA
GTGTAATATATTTAACGTGAGCGATAGCAGGGCCCAGCTACCCGAGTGTCGAGTACTCGG
TTCCCACTATAGTGTGGCGTCTACGAAGCCCACTTTTATTGGATCCGCATTGAGGCAAAG
CCAAATTTACCAAATTCGTTACTCCTATCAACCAAGTGCCAGCTCTTTTGTTTTTTAAAA
GTTCTTTCTCATCCCGGTCGTATATTACGACCATTTTATCTGCTACGGAACGCATGATGC
TGCAGAAGGATTGTGTCCAAGTCAAAACGTGAGGAGAGTGCAATCTGCCTAATCATAACG
GACCAAAGCGACGATGCCTTCTGCAATTTCCATAGTTTTTCTATCACTGGTACCCTGCGT
TCTGGAATGGAATGTTTTCTTAGATCATTTATTATCAAACTTCGAGAATTTTCTTCGCAG
AAGTCACCAAGGCAACCGCATAGTCGTGTTGCCACACTGTCTAACATGTTTAAGAAAATA
ACGATCGTTTAAATAAAATCTGCTGTATTTGCGCGTACTTCACGAACGTGTCAGCTA

InterProScan

PIRSF
VANGL (IPR009539) - T[11-550] 2.9E-185
PANTHER
VANGL (IPR009539) - T[12-550] 1.9E-208
Pfam
VANGL (IPR009539) - T[41-550] 9.6E-216

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VANG1_HUMAN 48.881 % 476 4.07E-164
VANG2_HUMAN 47.619 % 389 6.56E-130