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TRANSCRIPT CARD

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  1. Clone 'cihA4O8T' > 
  2. Region 'REG00000659' > 
  3. Transcript 'KH2012:KH.C4.173.v2....'

Transcript Model

Transcript Id

KH2012:KH.C4.173.v2.A.SL1-1

Possible name(s)

VANGL1; VANGL2

Gene model

KH2012:KH.C4.173

Location

KhC4 [3,195,659 / 3,203,796]

Sequences

Amino acid sequence

Length: 550

>KH.C4.173.v2.A.SL1-1
LKIHMDTDKLQDNDSEYSLATNRSERSRHGHKRHRSHERGSRRHRNRGSGNELDDDYEGE
KTVTIRTPPMDGRHDSRATEGTISVNIPEDDNWGETNTFISGTTDVTQLSHESLAKLTKD
IEASIGFRDCGYVGTIIFALISYLSPIAFVVMPKFLWDNSSPLSACGTSCKGTLISMSFK
LLILLVASWAIFFRRQRTSMPKVFMFRSLIMVFVLLITLTYWLFYGIWILEQKEKDFQSI
IEFSDSMTNCLLFVHYLSLVLLELRHLQTTFVLEVIRTTDGERRFYNIGDLSIQRCSVWV
LEKYYCDFPVYNPALMRIPSRSARMKHINNTFKVYDVDGKPGNDTQGQNRAILAAVARRR
DAGHNERYYEEAEYERRVRKRRARLVAATEDAFTHIRKASEHEINTKGKSSNSVMECDAA
SEAIFPALARSLQKYLRTTRQHQHYQVEDIHKHLAFCIKNEMTPKAFLQRYINPGSYLTY
DPRHDSSQWDLVSDEPLVNMLKDGTVFRLNQPEYSLVVTVRKSPRIGLQEVFIDPDSYRY
VMHMQSETSV

Nucleotide sequence

Length: 2,367

>KH2012:KH.C4.173.v2.A.SL1-1
GTGAAATTTGTAAGAAACAGGCTTTTTTAGGTTGACTGTATTTTTCCTGATTTTAACCAC
TGGGAAATAGTTTGGATTGGTATAAACAATTGGAAGTAGCTGAAAATACACATGGACACG
GACAAATTACAAGACAATGATTCAGAGTATTCTCTGGCAACAAACAGATCGGAGCGGTCA
CGACATGGTCACAAGCGACACAGGTCACATGAGCGGGGAAGTCGTCGCCATAGAAACCGA
GGTAGTGGAAACGAGCTTGATGATGATTATGAAGGTGAGAAAACAGTCACAATTAGAACC
CCACCTATGGATGGGAGACACGACAGCAGAGCAACTGAAGGAACCATCTCTGTTAACATA
CCTGAGGATGATAACTGGGGCGAGACCAACACCTTTATATCAGGAACCACAGACGTCACG
CAACTCAGTCATGAATCGCTTGCAAAACTGACCAAGGATATTGAAGCTTCAATTGGTTTT
CGAGACTGTGGTTATGTTGGGACCATTATATTTGCCCTTATTTCCTACCTTTCCCCGATA
GCATTTGTGGTGATGCCGAAATTTTTGTGGGACAACTCATCTCCTCTTTCAGCGTGCGGC
ACCTCATGTAAAGGTACCCTCATCAGTATGTCATTCAAACTCCTCATACTCCTTGTAGCA
TCATGGGCAATATTTTTCCGACGCCAGAGAACCAGCATGCCAAAAGTGTTTATGTTCAGG
TCTCTGATCATGGTATTTGTTCTTCTAATCACACTCACGTACTGGCTGTTTTATGGCATC
TGGATTTTGGAGCAAAAGGAAAAAGACTTTCAGTCGATAATCGAGTTCTCAGACAGCATG
ACGAACTGCCTCTTATTCGTGCATTATCTCTCGCTTGTTTTACTCGAACTACGTCACTTA
CAAACCACCTTCGTGCTCGAAGTTATTCGAACCACCGATGGCGAACGACGGTTCTACAAC
ATTGGAGACTTGAGCATCCAGCGTTGTTCAGTGTGGGTGTTGGAGAAATATTATTGCGAC
TTTCCCGTGTATAATCCAGCCCTGATGCGTATACCTTCTCGTAGCGCACGTATGAAGCAT
ATCAACAATACATTTAAAGTGTATGACGTCGATGGCAAACCGGGCAATGACACACAAGGA
CAAAATCGTGCGATTCTTGCAGCGGTTGCTAGGCGACGAGATGCAGGACATAATGAAAGA
TATTATGAGGAAGCAGAATATGAGAGAAGAGTAAGGAAGAGACGAGCAAGGTTGGTCGCC
GCCACCGAAGACGCTTTCACTCACATTCGAAAAGCAAGCGAGCATGAAATTAACACGAAG
GGCAAGTCGTCCAACTCTGTCATGGAGTGCGACGCCGCCTCTGAGGCCATATTCCCCGCG
TTGGCTAGATCGTTGCAGAAGTACCTTCGCACCACACGTCAACACCAACATTACCAGGTA
GAAGATATCCATAAACATCTTGCTTTCTGTATCAAGAACGAAATGACTCCAAAAGCTTTC
CTACAAAGATACATCAATCCCGGCTCTTACTTGACCTATGATCCACGTCACGACTCTAGT
CAATGGGACTTAGTAAGCGACGAACCTCTTGTTAATATGCTTAAGGACGGCACAGTGTTT
CGACTTAACCAGCCCGAGTATTCCCTCGTCGTTACCGTGCGCAAATCTCCACGAATTGGT
TTGCAGGAGGTTTTCATTGATCCCGATTCTTACCGTTATGTAATGCACATGCAGAGCGAG
ACGTCGGTGTGACGTCATCATTTCATGACGTCATCCGACCGTAAGATCGCCTGCTTCGCT
CCGCCACGATCGGTACACCCCCGACACAAAGTGTAATATATTTAACGTGAGCGATAGCAG
GGCCCAGCTACCCGAGTGTCGAGTACTCGGTTCCCACTATAGTGTGGCGTCTACGAAGCC
CACTTTTATTGGATCCGCATTGAGGCAAAGCCAAATTTACCAAATTCGTTACTCCTATCA
ACCAAGTGCCAGCTCTTTTGTTTTTTAAAAGTTCTTTCTCATCCCGGTCGTATATTACGA
CCATTTTATCTGCTACGGAACGCATGATGCTGCAGAAGGATTGTGTCCAAGTCAAAACGT
GAGGAGAGTGCAATCTGCCTAATCATAACGGACCAAAGCGACGATGCCTTCTGCAATTTC
CATAGTTTTTCTATCACTGGTACCCTGCGTTCTGGAATGGAATGTTTTCTTAGATCATTT
ATTATCAAACTTCGAGAATTTTCTTCGCAGAAGTCACCAAGGCAACCGCATAGTCGTGTT
GCCACACTGTCTAACATGTTTAAGAAAATAACGATCGTTTAAATAAAATCTGCTGTATTT
GCGCGTACTTCACGAACGTGTCAGCTA

InterProScan

PIRSF
VANGL (IPR009539) - T[11-550] 2.9E-185
PANTHER
VANGL (IPR009539) - T[12-550] 1.9E-208
Pfam
VANGL (IPR009539) - T[41-550] 9.6E-216

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VANG1_HUMAN 48.881 % 476 4.07E-164
VANG2_HUMAN 47.619 % 389 6.56E-130