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TRANSCRIPT CARD

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  1. Clone 'citb7b9'
  2. Clone 'cien46486'
  3. Clone 'cien124979'
  4. Clone 'cilv007p11'
  5. Transcript 'KH2012:KH.C4.173.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.173.v1.A.SL4-1

Possible name(s)

VANGL1; VANGL2

Location

KhC4 [3,195,659 / 3,203,776]

Sequences

Amino acid sequence

Length: 499

>KH.C4.173.v1.A.SL4-1
KLKSYRKGEKTVTIRTPPMDGRHDSRATEGTISVNIPEDDNWGETNTFISGTTDVTQLSH
ESLAKLTKDIEASIGFRDCGYVGTIIFALISYLSPIAFVVMPKFLWDNSSPLSACGTSCK
GTLISMSFKLLILLVASWAIFFRRQRTSMPKVFMFRSLIMVFVLLITLTYWLFYGIWILE
QKEKDFQSIIEFSDSMTNCLLFVHYLSLVLLELRHLQTTFVLEVIRTTDGERRFYNIGDL
SIQRCSVWVLEKYYCDFPVYNPALMRIPSRSARMKHINNTFKVYDVDGKPGNDTQGQNRA
ILAAVARRRDAGHNERYYEEAEYERRVRKRRARLVAATEDAFTHIRKASEHEINTKGKSS
NSVMECDAASEAIFPALARSLQKYLRTTRQHQHYQVEDIHKHLAFCIKNEMTPKAFLQRY
INPGSYLTYDPRHDSSQWDLVSDEPLVNMLKDGTVFRLNQPEYSLVVTVRKSPRIGLQEV
FIDPDSYRYVMHMQSETSV

Nucleotide sequence

Length: 2,468

>KH2012:KH.C4.173.v1.A.SL4-1
GCTTTTTTAGGTTGACTGTATTTTTCCTGATTTTAACCACTGGGAAATAGTTTGGATTGG
TATAAACAATTGGAAGTAGCTGAAAATACACATGGACACGGACAAATTACAAGACAATGA
TTCAGAGTATTCTCTGGCAACAAACAGATCGGAGCGGTCACGACATGGTCACAAGCGACA
CAGGTCACATGAGCGGGGAAGTCGTCGCCATAGAAACCGAGGTAGTGGAAACGAGCTTGA
TGATGATTATGAAGCACGGACTCTTAAGTTACAAAGCATCCTGATCCATTCATAAGTCAT
TACAGCATGAAGACAGATATGAGAAGAAGGGCAATGTGGCATAATGCTGTTGAAAGCTGA
AAAGTTACAGAAAAGGTGAGAAAACAGTCACAATTAGAACCCCACCTATGGATGGGAGAC
ACGACAGCAGAGCAACTGAAGGAACCATCTCTGTTAACATACCTGAGGATGATAACTGGG
GCGAGACCAACACCTTTATATCAGGAACCACAGACGTCACGCAACTCAGTCATGAATCGC
TTGCAAAACTGACCAAGGATATTGAAGCTTCAATTGGTTTTCGAGACTGTGGTTATGTTG
GGACCATTATATTTGCCCTTATTTCCTACCTTTCCCCGATAGCATTTGTGGTGATGCCGA
AATTTTTGTGGGACAACTCATCTCCTCTTTCAGCGTGCGGCACCTCATGTAAAGGTACCC
TCATCAGTATGTCATTCAAACTCCTCATACTCCTTGTAGCATCATGGGCAATATTTTTCC
GACGCCAGAGAACCAGCATGCCAAAAGTGTTTATGTTCAGGTCTCTGATCATGGTATTTG
TTCTTCTAATCACACTCACGTACTGGCTGTTTTATGGCATCTGGATTTTGGAGCAAAAGG
AAAAAGACTTTCAGTCGATAATCGAGTTCTCAGACAGCATGACGAACTGCCTCTTATTCG
TGCATTATCTCTCGCTTGTTTTACTCGAACTACGTCACTTACAAACCACCTTCGTGCTCG
AAGTTATTCGAACCACCGATGGCGAACGACGGTTCTACAACATTGGAGACTTGAGCATCC
AGCGTTGTTCAGTGTGGGTGTTGGAGAAATATTATTGCGACTTTCCCGTGTATAATCCAG
CCCTGATGCGTATACCTTCTCGTAGCGCACGTATGAAGCATATCAACAATACATTTAAAG
TGTATGACGTCGATGGCAAACCGGGCAATGACACACAAGGACAAAATCGTGCGATTCTTG
CAGCGGTTGCTAGGCGACGAGATGCAGGACATAATGAAAGATATTATGAGGAAGCAGAAT
ATGAGAGAAGAGTAAGGAAGAGACGAGCAAGGTTGGTCGCCGCCACCGAAGACGCTTTCA
CTCACATTCGAAAAGCAAGCGAGCATGAAATTAACACGAAGGGCAAGTCGTCCAACTCTG
TCATGGAGTGCGACGCCGCCTCTGAGGCCATATTCCCCGCGTTGGCTAGATCGTTGCAGA
AGTACCTTCGCACCACACGTCAACACCAACATTACCAGGTAGAAGATATCCATAAACATC
TTGCTTTCTGTATCAAGAACGAAATGACTCCAAAAGCTTTCCTACAAAGATACATCAATC
CCGGCTCTTACTTGACCTATGATCCACGTCACGACTCTAGTCAATGGGACTTAGTAAGCG
ACGAACCTCTTGTTAATATGCTTAAGGACGGCACAGTGTTTCGACTTAACCAGCCCGAGT
ATTCCCTCGTCGTTACCGTGCGCAAATCTCCACGAATTGGTTTGCAGGAGGTTTTCATTG
ATCCCGATTCTTACCGTTATGTAATGCACATGCAGAGCGAGACGTCGGTGTGACGTCATC
ATTTCATGACGTCATCCGACCGTAAGATCGCCTGCTTCGCTCCGCCACGATCGGTACACC
CCCGACACAAAGTGTAATATATTTAACGTGAGCGATAGCAGGGCCCAGCTACCCGAGTGT
CGAGTACTCGGTTCCCACTATAGTGTGGCGTCTACGAAGCCCACTTTTATTGGATCCGCA
TTGAGGCAAAGCCAAATTTACCAAATTCGTTACTCCTATCAACCAAGTGCCAGCTCTTTT
GTTTTTTAAAAGTTCTTTCTCATCCCGGTCGTATATTACGACCATTTTATCTGCTACGGA
ACGCATGATGCTGCAGAAGGATTGTGTCCAAGTCAAAACGTGAGGAGAGTGCAATCTGCC
TAATCATAACGGACCAAAGCGACGATGCCTTCTGCAATTTCCATAGTTTTTCTATCACTG
GTACCCTGCGTTCTGGAATGGAATGTTTTCTTAGATCATTTATTATCAAACTTCGAGAAT
TTTCTTCGCAGAAGTCACCAAGGCAACCGCATAGTCGTGTTGCCACACTGTCTAACATGT
TTAAGAAAATAACGATCGTTTAAATAAAATCTGCTGTATTTGCGCGTACTTCACGAACGT
GTCAGCTA

InterProScan

PIRSF
VANGL (IPR009539) - T[1-499] 2.3E-180
PANTHER
VANGL (IPR009539) - T[5-499] 5.0E-203
Pfam
VANGL (IPR009539) - T[6-499] 2.5E-214

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VANG1_HUMAN 50.495 % 475 2.64E-164
VANG2_HUMAN 49.8 % 387 3.22E-130