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  1. Transcript 'KH2012:KH.C4.173.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.173.v1.A.SL1-1

Possible name(s)

VANGL1; VANGL2

Location

KhC4 [3,195,659 / 3,203,796]

Sequences

Amino acid sequence

Length: 499

>KH.C4.173.v1.A.SL1-1
KLKSYRKGEKTVTIRTPPMDGRHDSRATEGTISVNIPEDDNWGETNTFISGTTDVTQLSH
ESLAKLTKDIEASIGFRDCGYVGTIIFALISYLSPIAFVVMPKFLWDNSSPLSACGTSCK
GTLISMSFKLLILLVASWAIFFRRQRTSMPKVFMFRSLIMVFVLLITLTYWLFYGIWILE
QKEKDFQSIIEFSDSMTNCLLFVHYLSLVLLELRHLQTTFVLEVIRTTDGERRFYNIGDL
SIQRCSVWVLEKYYCDFPVYNPALMRIPSRSARMKHINNTFKVYDVDGKPGNDTQGQNRA
ILAAVARRRDAGHNERYYEEAEYERRVRKRRARLVAATEDAFTHIRKASEHEINTKGKSS
NSVMECDAASEAIFPALARSLQKYLRTTRQHQHYQVEDIHKHLAFCIKNEMTPKAFLQRY
INPGSYLTYDPRHDSSQWDLVSDEPLVNMLKDGTVFRLNQPEYSLVVTVRKSPRIGLQEV
FIDPDSYRYVMHMQSETSV

Nucleotide sequence

Length: 2,488

>KH2012:KH.C4.173.v1.A.SL1-1
GTGAAATTTGTAAGAAACAGGCTTTTTTAGGTTGACTGTATTTTTCCTGATTTTAACCAC
TGGGAAATAGTTTGGATTGGTATAAACAATTGGAAGTAGCTGAAAATACACATGGACACG
GACAAATTACAAGACAATGATTCAGAGTATTCTCTGGCAACAAACAGATCGGAGCGGTCA
CGACATGGTCACAAGCGACACAGGTCACATGAGCGGGGAAGTCGTCGCCATAGAAACCGA
GGTAGTGGAAACGAGCTTGATGATGATTATGAAGCACGGACTCTTAAGTTACAAAGCATC
CTGATCCATTCATAAGTCATTACAGCATGAAGACAGATATGAGAAGAAGGGCAATGTGGC
ATAATGCTGTTGAAAGCTGAAAAGTTACAGAAAAGGTGAGAAAACAGTCACAATTAGAAC
CCCACCTATGGATGGGAGACACGACAGCAGAGCAACTGAAGGAACCATCTCTGTTAACAT
ACCTGAGGATGATAACTGGGGCGAGACCAACACCTTTATATCAGGAACCACAGACGTCAC
GCAACTCAGTCATGAATCGCTTGCAAAACTGACCAAGGATATTGAAGCTTCAATTGGTTT
TCGAGACTGTGGTTATGTTGGGACCATTATATTTGCCCTTATTTCCTACCTTTCCCCGAT
AGCATTTGTGGTGATGCCGAAATTTTTGTGGGACAACTCATCTCCTCTTTCAGCGTGCGG
CACCTCATGTAAAGGTACCCTCATCAGTATGTCATTCAAACTCCTCATACTCCTTGTAGC
ATCATGGGCAATATTTTTCCGACGCCAGAGAACCAGCATGCCAAAAGTGTTTATGTTCAG
GTCTCTGATCATGGTATTTGTTCTTCTAATCACACTCACGTACTGGCTGTTTTATGGCAT
CTGGATTTTGGAGCAAAAGGAAAAAGACTTTCAGTCGATAATCGAGTTCTCAGACAGCAT
GACGAACTGCCTCTTATTCGTGCATTATCTCTCGCTTGTTTTACTCGAACTACGTCACTT
ACAAACCACCTTCGTGCTCGAAGTTATTCGAACCACCGATGGCGAACGACGGTTCTACAA
CATTGGAGACTTGAGCATCCAGCGTTGTTCAGTGTGGGTGTTGGAGAAATATTATTGCGA
CTTTCCCGTGTATAATCCAGCCCTGATGCGTATACCTTCTCGTAGCGCACGTATGAAGCA
TATCAACAATACATTTAAAGTGTATGACGTCGATGGCAAACCGGGCAATGACACACAAGG
ACAAAATCGTGCGATTCTTGCAGCGGTTGCTAGGCGACGAGATGCAGGACATAATGAAAG
ATATTATGAGGAAGCAGAATATGAGAGAAGAGTAAGGAAGAGACGAGCAAGGTTGGTCGC
CGCCACCGAAGACGCTTTCACTCACATTCGAAAAGCAAGCGAGCATGAAATTAACACGAA
GGGCAAGTCGTCCAACTCTGTCATGGAGTGCGACGCCGCCTCTGAGGCCATATTCCCCGC
GTTGGCTAGATCGTTGCAGAAGTACCTTCGCACCACACGTCAACACCAACATTACCAGGT
AGAAGATATCCATAAACATCTTGCTTTCTGTATCAAGAACGAAATGACTCCAAAAGCTTT
CCTACAAAGATACATCAATCCCGGCTCTTACTTGACCTATGATCCACGTCACGACTCTAG
TCAATGGGACTTAGTAAGCGACGAACCTCTTGTTAATATGCTTAAGGACGGCACAGTGTT
TCGACTTAACCAGCCCGAGTATTCCCTCGTCGTTACCGTGCGCAAATCTCCACGAATTGG
TTTGCAGGAGGTTTTCATTGATCCCGATTCTTACCGTTATGTAATGCACATGCAGAGCGA
GACGTCGGTGTGACGTCATCATTTCATGACGTCATCCGACCGTAAGATCGCCTGCTTCGC
TCCGCCACGATCGGTACACCCCCGACACAAAGTGTAATATATTTAACGTGAGCGATAGCA
GGGCCCAGCTACCCGAGTGTCGAGTACTCGGTTCCCACTATAGTGTGGCGTCTACGAAGC
CCACTTTTATTGGATCCGCATTGAGGCAAAGCCAAATTTACCAAATTCGTTACTCCTATC
AACCAAGTGCCAGCTCTTTTGTTTTTTAAAAGTTCTTTCTCATCCCGGTCGTATATTACG
ACCATTTTATCTGCTACGGAACGCATGATGCTGCAGAAGGATTGTGTCCAAGTCAAAACG
TGAGGAGAGTGCAATCTGCCTAATCATAACGGACCAAAGCGACGATGCCTTCTGCAATTT
CCATAGTTTTTCTATCACTGGTACCCTGCGTTCTGGAATGGAATGTTTTCTTAGATCATT
TATTATCAAACTTCGAGAATTTTCTTCGCAGAAGTCACCAAGGCAACCGCATAGTCGTGT
TGCCACACTGTCTAACATGTTTAAGAAAATAACGATCGTTTAAATAAAATCTGCTGTATT
TGCGCGTACTTCACGAACGTGTCAGCTA

InterProScan

PIRSF
VANGL (IPR009539) - T[1-499] 2.3E-180
PANTHER
VANGL (IPR009539) - T[5-499] 5.0E-203
Pfam
VANGL (IPR009539) - T[6-499] 2.5E-214

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VANG1_HUMAN 50.495 % 475 2.64E-164
VANG2_HUMAN 49.8 % 387 3.22E-130