- Clone 'cicl045g20' >
- Clone 'ma169m11' >
- Clone 'cien47559' >
- Clone 'ma145m22' >
- Transcript 'KH2012:KH.C3.303.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.303.v1.A.ND2-1
Possible name(s)
HMCN1; IGSF9; IGSF9B
Gene model
Location
KhC3 [1,302,429 / 1,316,181]
Amino acid sequence
Length: 536
>KH.C3.303.v1.A.ND2-1
MNGQSQALLVGTIFWILLSVETRGLISVSVGATALLPCPSSRNDQDLPHVIEWLRQDRPV
PVFIKIGKYPPHVNPHFKGRMSLLSNTATLRIQKVKLEDEGWYECRAYYFKHAVESSNGT
LVHPSNGTLTKLYVTAPPAFKSTPPPSTVARVRESLLLQCRVVGKPPPDVTWRKDGWLLQ
NGENGIKINGGKLLVRSLTTSHRGNYECQGRNPQGQVEHTTSVFVQAPPEITVSPKDLDA
KEEQDAFFYCKAEGYPADISYSWFFNGLEVGSCPQLRGRFRTFNDGTFEIESVSKEDTGN
ISCEAANDFGIAPRVTARLVVQYAAQVVDMPPINFAGISLPLILRCPSIAEPEVSSVTWR
KNGNSVGSGNNGGDRVFVNISGDLIFKAIQQSDEGLYSCTPYNILGTGGESPKMRLVVKN
PPQFIAKPETQYELEIGKPFIASCYGNGDPPTTVTWRKVEAENDYFNGDRVSRNHSSLFI
TSVSKSDNGIWQCVLSNAVANIQHHMLRVRLQLRRHRATRLSSGCLDMTVVTRNIS
Nucleotide sequence
Length: 3,134
>KH2012:KH.C3.303.v1.A.ND2-1
TGCAGAACTAGAGTGATCTATAGGTCAACACCTGAACCACCGAATTGGAAAGTCTATCTG
ACTTTTGTTGCTTATTTTAAAAACTCAAATTGTTGAAACAACAGTGTTAAATGAATGGAC
AAAGTCAAGCCCTGTTGGTTGGAACTATATTCTGGATTCTTTTGTCAGTTGAAACAAGGG
GTCTGATATCAGTAAGCGTTGGAGCCACAGCATTGTTACCTTGTCCTAGTTCACGAAACG
ATCAAGATCTCCCCCACGTCATAGAATGGTTACGTCAGGACAGGCCTGTTCCAGTCTTTA
TCAAAATAGGAAAATACCCGCCGCATGTCAATCCTCACTTTAAAGGACGCATGTCACTGC
TATCCAACACTGCCACCTTACGGATACAAAAAGTAAAACTAGAGGACGAAGGATGGTACG
AGTGTCGTGCATATTATTTCAAACATGCTGTGGAAAGTTCAAACGGAACTCTAGTTCACC
CATCTAATGGAACACTTACCAAACTTTACGTAACCGCGCCCCCTGCCTTTAAATCGACCC
CACCACCCTCAACCGTGGCTCGTGTTCGTGAATCGTTACTTCTGCAATGTCGTGTTGTCG
GGAAACCCCCTCCTGACGTCACATGGAGGAAGGATGGCTGGTTGTTGCAAAACGGCGAGA
ATGGGATTAAAATCAACGGAGGAAAACTTCTCGTTAGATCACTGACTACGTCACATCGTG
GCAACTATGAATGCCAGGGCAGAAACCCACAGGGCCAAGTAGAACATACGACATCTGTGT
TTGTACAAGCCCCGCCTGAAATTACGGTATCTCCGAAAGATCTTGATGCAAAAGAAGAAC
AAGACGCTTTTTTTTACTGCAAAGCAGAAGGATATCCAGCTGATATAAGCTACAGTTGGT
TTTTCAATGGGTTGGAGGTTGGTAGTTGCCCACAGTTACGCGGCCGGTTCAGAACATTTA
ACGACGGAACATTCGAAATTGAGAGTGTTAGCAAAGAAGACACCGGAAATATAAGTTGTG
AGGCTGCGAACGATTTTGGGATTGCACCACGTGTGACTGCACGGCTTGTAGTTCAATATG
CCGCCCAAGTGGTCGATATGCCGCCAATTAACTTCGCTGGAATTTCCCTTCCTTTAATTT
TACGTTGCCCATCGATAGCTGAACCGGAGGTCAGTAGTGTAACGTGGAGGAAGAACGGAA
ACAGCGTTGGAAGTGGCAACAACGGGGGTGATCGTGTATTTGTAAATATCTCGGGAGATC
TCATATTTAAGGCCATCCAGCAATCTGATGAAGGTCTTTACTCATGTACACCTTATAACA
TATTGGGGACGGGAGGAGAGTCTCCAAAAATGCGACTAGTTGTAAAAAATCCTCCGCAAT
TTATTGCTAAACCTGAAACGCAATATGAACTGGAAATCGGGAAGCCTTTTATTGCGTCAT
GCTACGGAAACGGTGACCCCCCGACAACTGTGACCTGGCGAAAAGTGGAAGCAGAAAATG
ATTACTTCAACGGTGACCGTGTCTCACGAAATCATAGCAGTCTCTTCATTACCTCTGTTT
CCAAATCTGATAACGGAATATGGCAATGTGTTCTTTCCAATGCTGTAGCGAATATACAAC
ACCACATGCTGCGAGTGAGGTTACAGTTGCGACGTCATCGAGCAACGCGACTGTCAAGTG
GGTGCCTGGATATGACGGTGGTTACCCGCAACATTTCATGATCTGGTATAAAAAAGCTGA
ACAGGGCGACCATACGTGGTCAACGTCTTATGTTGAAGGAGGTCGCAAGGTGGCGACTGT
AAGTCGTCTCGAACCAGGAACAGTTTATCAATTTTCATTACTCTCGGAAAATGTTCTTGG
TAGTGGTCCTTTTAGCAGAACTGTCACCAAGAAAACTAAAGTGATTACTAAGAACAAGAG
CCTTGCATCTGTTACACACGTCGCAATACCGCCACCTCGTGACCTTCAATATTACATCGA
ATCAGAGATAATTGTGTTATCATGGAAACCACCTACGCTCCCACCATCTATTAGTTTGCT
AGGTTTCTTGGTCGAATTTCAAAAACAAAACAATAATCCTGATGAAGCTGCCCCTCTTGA
TAAATCTATAGAAAATCGATCCAAAGAAACAATGAGCAATGCACGATTGAGAAGGAATTC
GATCTCATCACCAGTGATCGTAAAAGGACAATTAACAGAATCGGATTCAAATGCATGGAC
AATCTTAAATGCGGTAGCCGCTAATACGACTTCATACGGCATACCAGCTGGTAGTCTGGT
GCAGAATGCGATTTATCGATTTCGTGTTTTATCCGTTACCAGCGAATCATACGGATTGCC
AAGCCAATACGTCACCGTGAGCACCGAAGGGCTTTCGGTGTACCTCCCCGCTTCACCTAT
TGGGAATTATGCTTCCTCATCCATCGCGAATGCTGGCTTGATATCCGGCGTTATAACCGG
ATCTATATTTATATTTGTAACCATTGCCATTGCTATCGGATACTGGCATCACCGACACGG
AGCAACTTCGGCACTTCAACAAACGAGCTACTTAAAGGAAGATGCCGTAAAAAGCTTTCT
TACCAACCGGAAAGAAGACCAAGATTTTGCAAAATCAGAAAACTATAAATATGATCTTTC
TCCGCCTGAAAGCTCAGTTTTGTACACGAAAGAGCGAAGGGAGGAAAACATTAATGATGG
AGTTTTGTGGAAGATCAAAAAGAAGATTGAAAAGAACAAAAAGAGAAGAGATGATCATAA
AGTAGAACACTACTTTGAGAAAAATAAGAAAGTGAAACGCAGCAAAAGTTTGTCACAACA
CGGTAAAGAAACAAGCAAATTATCTTCGATTCAGAGATCACTAGATGGAAAATTCCATGT
TTCTAATGTCCGCAAGTCCGATGCATCTCTATCATATTCCCCCGATCAACCAAACCAAGT
GACTTGGAGGAAAGCTGGAAGAAGTGAAAGGAAAATGAGACCAATCAGCGACTCTTATCT
TTCGAGAAATCCTCCGAAGATGTTTGAAGTGGAGGAAAGCATCATAGAAGAGGAAGGAAC
ATTGGAAATTGATTGCAGCAGAAGCAATATAGAAGTTCGGTATCTCAGAGATAACGCTCA
AAGATTTTCTACAC
| Gene3D |
Ig-like_fold (IPR013783) - T[16-139] 6.9E-20 - T[140-229] 1.7E-19 - T[230-327] 4.6E-18 - T[339-419] 4.7E-10 - T[420-520] 3.5E-13 |
| SMART |
Ig_sub (IPR003599) - T[23-125] 9.2E-9 - T[145-226] 6.9E-10 - T[235-322] 9.2E-6 - T[331-419] 0.015 - T[429-514] 0.0065 |
| Pfam |
Ig_V-set (IPR013106) - T[25-118] 1.1E-11 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[26-139] 1.36E-14 - T[143-235] 1.54E-21 - T[223-322] 4.77E-18 - T[342-428] 9.76E-13 - T[415-504] 2.52E-12 |
| SMART |
Ig_sub2 (IPR003598) - T[29-112] 0.085 - T[151-215] 1.2E-10 - T[241-310] 5.9E-4 - T[337-406] 2.7E-4 - T[435-500] 1.1E-5 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[31-122] 8.43 - T[138-224] 11.442 - T[229-321] 12.078 - T[337-417] 9.827 - T[422-503] 11.37 |
| SMART |
Ig_V-set (IPR013106) - T[33-107] 4.7E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 26.458 % | 129 | 3.92E-31 |
| TUTLB_HUMAN | 37.204 % | 317 | 6.78E-96 |
| TUTLA_HUMAN | 35.391 % | 296 | 6.18E-89 |