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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C14.209.v2...' > 
  2. Clone 'cima878984' > 
  3. Transcript 'KH2012:KH.C3.204.v3....'

Transcript Model

Transcript Id

KH2012:KH.C3.204.v3.A.SL2-1

Possible name(s)

SRSF1; SRSF3; SRSF7

Gene model

KH2012:KH.C3.204

Location

KhC3 [1,186,680 / 1,188,409]

Sequences

Amino acid sequence

Length: 133

>KH.C3.204.v3.A.SL2-1
LKMSYRNSGPLDCKVYVGNLGSQGSKNELERVFGYYGALKNVWVARNPPGFAFVEFEDNR
DAEDAVRALDGRTVCGVRARVEMSSGQSRRGNDRDRGPPRGRRDDYYDRNRRGRYDRLTT
TTTNAQLQPVIVF

Nucleotide sequence

Length: 1,213

>KH2012:KH.C3.204.v3.A.SL2-1
AAGTAGCACAATTTAAAAGTAACTGAAAATGTCTTACCGAAACTCTGGTCCCTTGGATTG
CAAGGTTTATGTTGGAAATCTTGGCAGTCAAGGATCTAAAAATGAACTTGAACGTGTTTT
TGGGTACTATGGTGCTCTCAAAAACGTGTGGGTCGCAAGAAACCCTCCGGGTTTTGCTTT
TGTTGAGTTTGAAGATAATAGAGATGCAGAAGATGCCGTTCGTGCACTTGATGGAAGAAC
CGTTTGTGGAGTAAGAGCGAGAGTTGAAATGTCATCTGGACAATCCCGTCGTGGAAATGA
TAGAGATCGTGGACCACCACGCGGTCGACGAGATGATTATTATGATAGAAATCGACGTGG
TAGATATGACAGGCTCACCACAACCACAACCAATGCCCAACTTCAGCCTGTAATCGTTTT
TTAAAGCTCACCTACTTAGCTACTACACGACTACAATGCAGCAACTATAAACTTATCTTC
AATCAAATTCACCTCCTCATCGCGCCCATTCTACATTCCTACTGCGTTAAATTAAACAAC
GGATCGATAATGCCAACCTCGGAACTTCATCTAATATTCTGATAAAACTAATTTCTTCAT
GCATCTGACAACCACCACTTCGTCTTCTGCCAGTGAACAACTATTTTTATTGCTGTTTAA
GTTTTTCATTTTTAAAAGATAATTTTAAAACAACAGCTGTTCAAGTAAATTAAATTTAGG
TTAAACATTTTTTGTGCTTTGTAAAATCCATTTATTGTACTTAACTAAATTATAAAACCA
GATCTCGCTCAAAGAGTCCACGCCGTCATTCAAGAAGTCGCAGTAGAAGTCCTCGCAGGG
AGAGAAGAAGAAATAGCTACAGCAGATCCCCAGTAACGAAAGATAGGGGTTCACAAAGTC
CAAGAAGATCTGTATCTCCACCACGAAGATCCTTAAGCAGAAGTGTAAGTCCATATGGTA
ATGGACGCGACAGTAGAAGCAGAAGTCGTTCATAATATAAAACACAGAAGTTGCTGCCAA
GAAACAACTTCTATATGCTGTACAAACCATCAACAATGTTTGTAACAAGCAGAACTATAC
ATAGCACTACAATTGGGGTACTGTTGTTTGTGGCTATGTTTTATGCATTTTAAATTTTGA
AAGCGCTGTATATCTGCTATAATAATAAAACATTGTTTAAATAAAATTCATGTATTTTTC
GTGATCATTTTAG

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[6-88] 6.8E-23
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[12-114] 2.01E-24
ProSiteProfiles
RRM_dom (IPR000504) - T[13-86] 16.534
SMART
RRM_dom (IPR000504) - T[14-82] 3.3E-18
Pfam
RRM_dom (IPR000504) - T[15-76] 1.2E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SRSF3_HUMAN 72.632 % 144 3.99E-45
SRSF7_HUMAN 66.292 % 120 6.14E-35