Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C3.204.v2.A.SL1-1

Possible name(s)

SRSF1; SRSF3; SRSF7

Gene model

KH2012:KH.C3.204

Location

KhC3 [1,186,680 / 1,188,406]

Sequences

Amino acid sequence

Length: 133

>KH.C3.204.v2.A.SL1-1
LKMSYRNSGPLDCKVYVGNLGSQGSKNELERVFGYYGALKNVWVARNPPGFAFVEFEDNR
DAEDAVRALDGRTVCGVRARVEMSSGQSRRGNDRDRGPPRGRRDDYYDRNRRGRYDRLTT
TTTNAQLQPVIVF

Nucleotide sequence

Length: 1,061

>KH2012:KH.C3.204.v2.A.SL1-1
TAGCACAATTTAAAAGTAACTGAAAATGTCTTACCGAAACTCTGGTCCCTTGGATTGCAA
GGTTTATGTTGGAAATCTTGGCAGTCAAGGATCTAAAAATGAACTTGAACGTGTTTTTGG
GTACTATGGTGCTCTCAAAAACGTGTGGGTCGCAAGAAACCCTCCGGGTTTTGCTTTTGT
TGAGTTTGAAGATAATAGAGATGCAGAAGATGCCGTTCGTGCACTTGATGGAAGAACCGT
TTGTGGAGTAAGAGCGAGAGTTGAAATGTCATCTGGACAATCCCGTCGTGGAAATGATAG
AGATCGTGGACCACCACGCGGTCGACGAGATGATTATTATGATAGAAATCGACGTGGTAG
ATATGACAGGCTCACCACAACCACAACCAATGCCCAACTTCAGCCTGTAATCGTTTTTTA
AAGCTCACCTACTTAGCTACTACACGACTACAATGCAGCAACTATAAACTTATCTTCAAT
CAAATTCACCTCCTCATCGCGCCCATTCTACATTCCTACTGCGTTAAATTAAACAACGGA
TCGATAATGCCAACCTCGGAACTTCATCTAATATTCTGATAAAACTAATTTCTTCATGCA
TCTGACAACCACCACTTCGTCTTCTGCCAATCTCGCTCAAAGAGTCCACGCCGTCATTCA
AGAAGTCGCAGTAGAAGTCCTCGCAGGGAGAGAAGAAGAAATAGCTACAGCAGATCCCCA
GTAACGAAAGATAGGGGTTCACAAAGTCCAAGAAGATCTGTATCTCCACCACGAAGATCC
TTAAGCAGAAGTGTAAGTCCATATGGTAATGGACGCGACAGTAGAAGCAGAAGTCGTTCA
TAATATAAAACACAGAAGTTGCTGCCAAGAAACAACTTCTATATGCTGTACAAACCATCA
ACAATGTTTGTAACAAGCAGAACTATACATAGCACTACAATTGGGGTACTGTTGTTTGTG
GCTATGTTTTATGCATTTTAAATTTTGAAAGCGCTGTATATCTGCTATAATAATAAAACA
TTGTTTAAATAAAATTCATGTATTTTTCGTGATCATTTTAG

InterProScan

Gene3D	Nucleotide-bd_a/b_plait_sf (IPR012677) - T[6-88] 6.8E-23
SUPERFAMILY	RBD_domain_sf (IPR035979) - T[12-114] 2.01E-24
ProSiteProfiles	RRM_dom (IPR000504) - T[13-86] 16.534
SMART	RRM_dom (IPR000504) - T[14-82] 3.3E-18
Pfam	RRM_dom (IPR000504) - T[15-76] 1.2E-16

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SRSF3_HUMAN	72.632 %	144	3.99E-45
SRSF7_HUMAN	66.292 %	120	6.14E-35