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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L10.17.v1....' > 
  2. Clone 'cign047p12' > 
  3. Transcript 'KH2012:KH.C10.288.v2...' > 
  4. Transcript 'Cisavi.CG.ENS81.R1.2...' > 
  5. Transcript 'KH2012:KH.C3.204.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.204.v1.A.SL2-1

Possible name(s)

SRSF1; SRSF3; SRSF7

Gene model

KH2012:KH.C3.204

Location

KhC3 [1,186,680 / 1,188,409]

Sequences

Amino acid sequence

Length: 187

>KH.C3.204.v1.A.SL2-1
LKMSYRNSGPLDCKVYVGNLGSQGSKNELERVFGYYGALKNVWVARNPPGFAFVEFEDNR
DAEDAVRALDGRTVCGVRARVEMSSGQSRRGNDRDRGPPRGRRDDYYDRNRRGRYDRSRS
KSPRRHSRSRSRSPRRERRRNSYSRSPVTKDRGSQSPRRSVSPPRRSLSRSVSPYGNGRD
SRSRSRS

Nucleotide sequence

Length: 804

>KH2012:KH.C3.204.v1.A.SL2-1
AAGTAGCACAATTTAAAAGTAACTGAAAATGTCTTACCGAAACTCTGGTCCCTTGGATTG
CAAGGTTTATGTTGGAAATCTTGGCAGTCAAGGATCTAAAAATGAACTTGAACGTGTTTT
TGGGTACTATGGTGCTCTCAAAAACGTGTGGGTCGCAAGAAACCCTCCGGGTTTTGCTTT
TGTTGAGTTTGAAGATAATAGAGATGCAGAAGATGCCGTTCGTGCACTTGATGGAAGAAC
CGTTTGTGGAGTAAGAGCGAGAGTTGAAATGTCATCTGGACAATCCCGTCGTGGAAATGA
TAGAGATCGTGGACCACCACGCGGTCGACGAGATGATTATTATGATAGAAATCGACGTGG
TAGATATGACAGATCTCGCTCAAAGAGTCCACGCCGTCATTCAAGAAGTCGCAGTAGAAG
TCCTCGCAGGGAGAGAAGAAGAAATAGCTACAGCAGATCCCCAGTAACGAAAGATAGGGG
TTCACAAAGTCCAAGAAGATCTGTATCTCCACCACGAAGATCCTTAAGCAGAAGTGTAAG
TCCATATGGTAATGGACGCGACAGTAGAAGCAGAAGTCGTTCATAATATAAAACACAGAA
GTTGCTGCCAAGAAACAACTTCTATATGCTGTACAAACCATCAACAATGTTTGTAACAAG
CAGAACTATACATAGCACTACAATTGGGGTACTGTTGTTTGTGGCTATGTTTTATGCATT
TTAAATTTTGAAAGCGCTGTATATCTGCTATAATAATAAAACATTGTTTAAATAAAATTC
ATGTATTTTTCGTGATCATTTTAG

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[6-88] 1.6E-22
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[12-115] 5.24E-24
ProSiteProfiles
RRM_dom (IPR000504) - T[13-86] 16.534
SMART
RRM_dom (IPR000504) - T[14-82] 3.3E-18
Pfam
RRM_dom (IPR000504) - T[15-76] 2.5E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SRSF3_HUMAN 72.632 % 145 1.5E-44
SRSF7_HUMAN 69.62 % 122 6.4E-35